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SCN18_10_11_15_R1_P_scaffold_7350_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 497..1195

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein omp38 n=3 Tax=Xanthomonas campestris pv. translucens RepID=L0T4R4_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 230.0
  • Bit_score: 378
  • Evalue 4.00e-102
Stenotrophomonas maltophilia strain ZBG7B contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87509.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 229.0
  • Bit_score: 379
  • Evalue 1.90e-102
cell envelope biogenesis protein OmpA similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 232.0
  • Bit_score: 374
  • Evalue 1.20e-101

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGAGCACCCGCACCGTTATCCGCACTCTTTCCATCGGCCTGGTGACCGCCGCCGTGCTGTCGGCCTGCGCTACTGGCGGTTCCTATGTACAGAGCGACCCGTACGGCAACCAGACCCAGCAGCAGAACCGCACCGGCAAGGGGGCGCTGATCGGCGCGGCCATCGGTACCGCCGCCGGACTGCTCAGCGGCAGCAGCGCCACCGAGCGCCGCCAGCACGCGATGATCGGCGCAGGTATTGGCGCGCTGGGCGGCGCGGCCGTCGGCAACTACCAGGACCGCCAGGAACGCGCCCTGCGCGAGCGCACCGCCAACACCGGCATCGACGTCCAGCGCCAGGGCGACAACATCACCCTGAACCTGCCCGACGGCATTACCTTCGACTTCAACAAGACCACGCTCAAGCCGCAGTTCTATGGCGCCCTCAACGGCGTGGCCTCGACCCTGGCCGAGTACAACCAGACCATGATCGAAGTGGTCGGCCACACCGACAGCATCGGCACCGACACGGTCAACAACCGCATCTCCAAGGAACGCGCCGACGCCGTGGCGGCCTATCTGGCCGCGCAGGGCGTGCAGCGCGAACGCATCGAGACCCTGGGCGCCGGCAAGAACTACCCGATCGCCAGCAACGACACCGATGCCGGCCGCGCGCAGAACCGCCGCGTCGAGATCCGCGTCATCCCGCTGCGTTCGTGA
PROTEIN sequence
Length: 233
MSTRTVIRTLSIGLVTAAVLSACATGGSYVQSDPYGNQTQQQNRTGKGALIGAAIGTAAGLLSGSSATERRQHAMIGAGIGALGGAAVGNYQDRQERALRERTANTGIDVQRQGDNITLNLPDGITFDFNKTTLKPQFYGALNGVASTLAEYNQTMIEVVGHTDSIGTDTVNNRISKERADAVAAYLAAQGVQRERIETLGAGKNYPIASNDTDAGRAQNRRVEIRVIPLRS*