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SCN18_10_11_15_R1_P_scaffold_5812_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(2..553)

Top 3 Functional Annotations

Value Algorithm Source
Pilus biogenesis protein n=1 Tax=Xanthomonas axonopodis pv. citri (strain 306) RepID=Q8PHL2_XANAC similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 186.0
  • Bit_score: 290
  • Evalue 6.60e-76
General secretion pathway protein GspE {ECO:0000313|EMBL:KHD61721.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. phaseoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 186.0
  • Bit_score: 292
  • Evalue 3.20e-76
type IV-A pilus assembly ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 186.0
  • Bit_score: 290
  • Evalue 1.90e-76

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGAATACAGCCGTTGCCGCCAATCTGGTGGGCATCACCGGGATTGCCCGCCGCCTGGTGCAGGACGGGGCGCTGGACGAGGCGGCGGCGCGCAACGCGATGGCGCAGGCCGGGACGGCCAAGGTGCCGCTGGCGCAGTGGCTGGCCGAGAAGAAGCTGGTCAACGCCGCGCAGCTGGCGGCGGCCAATGCCGTCGAGTTCGGCATGCCGTTGCTGGATGCCTCGGTGTTTGACGCCAGCCAGAACGCGATGAAGCTGGTCAGCGAGGAGCTGCTGCGCAAGCACAATGTGCTGCCGCTGTTCAAGCGCGGCGGCAAGCTGTTCATCGGCACCAGCAACCCGACCCAGTCGCTGGACGAGATCAAGTTCCATACCAACCTGGTGGTCGAGCCGATCCTGGTGGACGAGGACCAGATCCGGCGCACGCTGGACCAGTGGGTGGCGAGCAACGAGAGCCTGGTCGGCGGGCTGGGCGATGATGAAGAGGGCGTGGGCGACCTGGAAGTCGCCGCCGGCGATGAGGACATGGGCGGTGGCGGCGACGCCGGCATC
PROTEIN sequence
Length: 184
MNTAVAANLVGITGIARRLVQDGALDEAAARNAMAQAGTAKVPLAQWLAEKKLVNAAQLAAANAVEFGMPLLDASVFDASQNAMKLVSEELLRKHNVLPLFKRGGKLFIGTSNPTQSLDEIKFHTNLVVEPILVDEDQIRRTLDQWVASNESLVGGLGDDEEGVGDLEVAAGDEDMGGGGDAGI