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SCN18_10_11_15_R1_P_scaffold_6114_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1043..1579

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial biogenesis protein n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z0Y0_XANCT similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 170.0
  • Bit_score: 165
  • Evalue 3.10e-38
Fimbrial biogenesis protein {ECO:0000313|EMBL:EKU24590.1}; TaxID=1195885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 170.0
  • Bit_score: 165
  • Evalue 4.40e-38
type IV pilus biogenesis/stability protein PilW similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 169.0
  • Bit_score: 157
  • Evalue 2.40e-36

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCGCTTCCGGCACAAAGGGACGCGCTTGGCTGAGCGCCTGCTCGTGTCGGTGCTGATCCTGCTGCTGCTCGTCGTTTGCGGGCATGGCGCCAAGGCGACCAAGGTCCGCTGGGACCAGCAGATGGCGCAGTCGTTCGACGTGCACGATGACCGGCAGGTGCGTACGCGCCTGCGCTACCAGGAGTTGCTGCGGCTGGCCGGAGACCGGTTCGGTCGCGGCGAACTGGATGCCGCTTTCAATCACGCCCGTTCGGCGCAGAAGCTCGAGCCAGCCAATCCCGCGGCCTACACGATGCAGGCGGTGGTCGAGGGGCGGCGCGGCAGGATGGAAGCGGCGGGCGAGCTGTATCGTCGCGCCGCGGAGCTGGCGCCCCGGCAAGGGGATGTATTGAACAATTACGGTGCCTGGCTGTGCGCCAGCGGGCACCCGGCCGAGGCCCTGGTCTGGTTCGACCGCGCGGTGGCCGACCCCGGCTACCAGGAGCAGCGGGCCGATGCATTGGCCAACGCCGGTGGCTGCGCGCTGGATGCGGGG
PROTEIN sequence
Length: 179
MRFRHKGTRLAERLLVSVLILLLLVVCGHGAKATKVRWDQQMAQSFDVHDDRQVRTRLRYQELLRLAGDRFGRGELDAAFNHARSAQKLEPANPAAYTMQAVVEGRRGRMEAAGELYRRAAELAPRQGDVLNNYGAWLCASGHPAEALVWFDRAVADPGYQEQRADALANAGGCALDAG