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SCN18_10_11_15_R1_P_scaffold_3682_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1..1833

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 589.0
  • Bit_score: 964
  • Evalue 4.80e-278
Transcription termination factor Rho n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L858_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 589.0
  • Bit_score: 964
  • Evalue 3.40e-278
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 589.0
  • Bit_score: 956
  • Evalue 3.40e-276

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1833
TGGCCTTCCGCACCCTCCGGCCGGGTTCTCGTCCGGATCATTCCCAACCAGTTCGCCGCCCTGTCAGGCGCTCGCACGTCAGCGAGAGGAATCAAGCACTTGTCCGAGAACACTCCTTCCGAAACCGGGAGCGCCGACGCGCCCGTCGAGAAGCGCGTGCGCAAGCCGCGTGTCGCCAAGGCCGCCGAGGCCGCCGACAGCAGCAGCCCCGCTTCCGCCCCGGCCCAGTCCGCCCTGCCGCTGCCGGCCGGCGACGCTTCCCCCGCCCCGGCCGCTCCGGCCCCGGGCAACGAAGGCCAGGCGTCCGCGCCGGCCGGCAACCCGCACGGCGGCCAGGAAGGCGGCGAGCCGCGCGACGGCAACAACAACGCCCAGCGCCATGGCCAGCAGAACCCGCAGAATCAGCAGGGCCAGGGCCAGGGCCAGGGTCAGGGCAATCGCCGCGACCGCTTCCGCAACCGCCGCGAGCGCAACCGCGACCGTTTCCGCGACGATGGCGGCATGCCGCAGGACGGCGGCAACGAGACCTTCGTGCCGCGCCCGCACCCGAACGTGCCCGAAGGCTTCCCGGCCTATTCGCTGAGCGACCTGAAGCGGATGCCGGCGCACAAGCTGCTGGAGATCGCCGAGCAGCTCAGCATCCACGACGGCGTGGCGCGCGCGCGCAAGCAGGACGTGATCTTCGCCCTGCTGAAGGTGCTGACCCGCCACGGCGACGGCGTCGCCGCCGACGGCGTGCTGGAAATCCTGCCCGACGGCTTCGGCTTCCTGCGCGCGGCCGAGGCCAGCTACCTGGCCGGCCCGGACGACACCTACATCTCGCCCAGCCAGATCCGCCGCTTCAACCTGCGCACCGGCGACCACATCGCCGGCCGCATCCGCTTCCCGAAGGACGGCGAGCGCTACTTCGCGCTGAACATCGTCGACACCATCAACGGTGAGCCGATCGAAGCGTCGAAGAACAAGGTGCTGTTCGAGAACCTGACCCCGCTGTTCCCGCGCAAGCGCTTCACCCTGGAACGCGGCAATGGTTCCTCGGAAGACATCACCGGCCGCATCCTCGACCTGATGGCGCCGCAGGGCAAGGGCCAGCGCGCGCTGATCGTCTCCCCGCCCAAGGCGGGCAAGACGATGATGATGCAGCAGATCGCCACGGCCATCACCACCAACCACCCGGAAGTGCACCTGATCGTGCTGCTGGTGGACGAGCGCCCGGAAGAAGTGACCGAGATGCAGCGCACCGTGCGCGGCGAAGTGGTCTCCTCGACCTTCGACGAGCCGGCCGCACGCCACGTGCAGGTGGCCGAAATGGTGATCGAGCGCGCCAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTGGACTCGATCACCCGCCTGGCGCGTGCCTACAACAATGTCGTGCCCAGCTCCGGCAAGGTACTGACCGGCGGCGTGGACGCCAATGCCCTGCACCGCCCGAAGCGCTTCTTCGGCGCCGCGCGCAACGTCGAGGAAGGCGGCTCGCTGACCATCATCGCCACCGCGCTGGTCGAGACCGGCTCGAAGATGGACGAGGTGATCTACGAAGAGTTCAAGGGCACCGGCAACAGCGAAGTGCACCTGAACCGCCGCATCACCGAGAAGCGCGTGTACCCGGCCATCGACATCAACCGTTCCGGCACCCGCCGCGAAGACCTGCTGATCGAGCCGGAGCTGCTGCAGAAGATCTGGATCCTGCGCAAGCTGCTGCACCCGATGGACGAAATCGCCGCGATGGAATTCCTGCTCGACAAGATGAAGAACACCAAGTCCAACGACGAGTTCTTCGGTTCGATGAAGCGCTGA
PROTEIN sequence
Length: 611
WPSAPSGRVLVRIIPNQFAALSGARTSARGIKHLSENTPSETGSADAPVEKRVRKPRVAKAAEAADSSSPASAPAQSALPLPAGDASPAPAAPAPGNEGQASAPAGNPHGGQEGGEPRDGNNNAQRHGQQNPQNQQGQGQGQGQGNRRDRFRNRRERNRDRFRDDGGMPQDGGNETFVPRPHPNVPEGFPAYSLSDLKRMPAHKLLEIAEQLSIHDGVARARKQDVIFALLKVLTRHGDGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHIAGRIRFPKDGERYFALNIVDTINGEPIEASKNKVLFENLTPLFPRKRFTLERGNGSSEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQQIATAITTNHPEVHLIVLLVDERPEEVTEMQRTVRGEVVSSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHPMDEIAAMEFLLDKMKNTKSNDEFFGSMKR*