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SCN18_10_11_15_R1_P_scaffold_961_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(361..846)

Top 3 Functional Annotations

Value Algorithm Source
Putrescine transport protein {ECO:0000313|EMBL:CCP40939.1}; EC=2.1.3.3 {ECO:0000313|EMBL:CCP40939.1};; TaxID=1261556 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. translucens DSM 18974.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 158.0
  • Bit_score: 267
  • Evalue 9.60e-69
putrescine/spermidine ABC transporter permease n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003129839 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 161.0
  • Bit_score: 270
  • Evalue 1.10e-69
spermidine/putrescine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 163.0
  • Bit_score: 264
  • Evalue 1.30e-68

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGAGCATGGTCCGCGGCCAACGCTGGCTGGGCTGGAGCGTGCTGCTGGCCGGCTTCGCCTTCCTGTACCTGCCGATCCTGCTTCTGGTGCTGTACTCGTTCAATTCCTCGCGGCTGGCGACGGTGTGGGCGGGCTTCTCCACGCAGTGGTACGGCGAGCTGTTCCGCGACCGGCAGCTGCTGGAAGCGGCCTGGGTCAGCCTCAAGGTCGCGTTCTGGACTGCGACCGCGTCGATGGTGCTCGGCACCATGGCGGCGATGGCGATGACCCGTTTCCGGCGCTTTCCCGGCAAGACCGTGTTCGGCGCGCTGGTGACCGCGCCGCTGGTGATGCCGGAGGTGATCATCGGCCTGTCGATCCTGCTGATGCTGGTGTCGATGGGCGGCCTGTTCGGGCTGCCGTCCAAGGGCGTGGTGTCGATCTGGATCGCGCACGTCACCTTCACCCTGTCCTTCGTGACCGTGGTGGTGTCCTCGCGCCTGTAG
PROTEIN sequence
Length: 162
MSMVRGQRWLGWSVLLAGFAFLYLPILLLVLYSFNSSRLATVWAGFSTQWYGELFRDRQLLEAAWVSLKVAFWTATASMVLGTMAAMAMTRFRRFPGKTVFGALVTAPLVMPEVIIGLSILLMLVSMGGLFGLPSKGVVSIWIAHVTFTLSFVTVVVSSRL*