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SCN18_10_11_15_R1_P_scaffold_995_3

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 2465..3373

Top 3 Functional Annotations

Value Algorithm Source
recombinase RdgC n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002DFA0EE similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 301.0
  • Bit_score: 555
  • Evalue 3.10e-155
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 301.0
  • Bit_score: 555
  • Evalue 2.50e-155
rdgC; recombination associated protein similarity KEGG
DB: KEGG
  • Identity: 89.0
  • Coverage: 301.0
  • Bit_score: 541
  • Evalue 1.00e-151

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGTTTTTCAAGAACCTCACCCTGTTCCGCTTCCCCACCTCGGTCGATTTCTCCGAAGTCGATACCCTGCTGCCGCACGTCGTGCTCAAGCCGGTCGGCGCGCTGGAAATGACCTCGCGCGGCTTCATCTCGCCGTTCGGACGCGAGGAGAAGGAGCAGTTCTCGCACCGCATCGGCGACGCGCTGTGGCTCACCGTCGGCGGCGAGGAGAAGATCCTGCCCGGCGCGGTGGTCAACGACCTGCTGGCGCGGAAGCTCGAAGAGATCGAAGAGAAGGAAGGGCGCAAGCCCGGCGGCCGCGAGCGCAAGCGGCTCAAGGACGACCTGCTGCATGAACTGCTGCCACGCGCCTTCGTCAAGAGCTCGCGCACCGACGCCTTCCTCGACCTGCAGCACGGCTACGTCGCGGTGGATAGTTCCAGCCGCAAGACCGGCGAGAACGTGATGAGCGACATCCGCGGCATGCTCGGCAGCTTCCCGGCGATGCCGTTGAACGCCGAGGTCGCGCCGCGCGCGATCCTGACCGCGTGGATCGCCGGCGAGCCGCTGCCCGAAGGCCTGAGCCTGGGCGAAGAGTGCGAGATGAAGGACCCGGCCGAAGGCGGCGCGGTGGTCAAGTGCCAGCACCAGGAACTGCGCTGCGACGAGATCGACAAGCATCTGGACGCCGGCAAGCAGGTCACCAAGCTGGCGCTGATCTTCGAAGACAACCTGTCTTTCGTGCTCGGCGACGACCTGATCGTGCGCAAGCTCAAGTTCCTCGACGGCGCGCTGGACCAGCTCGAGCACATCGACGAGGAAGGCCGCCGCGCCGAACTCGACGCGCGCTTCGCCCTGCAGAGCGGCGAGATCCGCCGCCTGTTCCTGCTGCTCGAGCAGGCGTTCAAACTGAGCAAGGCCGACAGCTGA
PROTEIN sequence
Length: 303
MFFKNLTLFRFPTSVDFSEVDTLLPHVVLKPVGALEMTSRGFISPFGREEKEQFSHRIGDALWLTVGGEEKILPGAVVNDLLARKLEEIEEKEGRKPGGRERKRLKDDLLHELLPRAFVKSSRTDAFLDLQHGYVAVDSSSRKTGENVMSDIRGMLGSFPAMPLNAEVAPRAILTAWIAGEPLPEGLSLGEECEMKDPAEGGAVVKCQHQELRCDEIDKHLDAGKQVTKLALIFEDNLSFVLGDDLIVRKLKFLDGALDQLEHIDEEGRRAELDARFALQSGEIRRLFLLLEQAFKLSKADS*