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SCN18_10_11_15_R1_P_scaffold_4389_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 2..1930

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KT39_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 651.0
  • Bit_score: 640
  • Evalue 1.60e-180
Diguanylate cyclase {ECO:0000313|EMBL:EYC51314.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 652.0
  • Bit_score: 644
  • Evalue 1.50e-181
signal transduction protein containing a membrane domain an EAL and a GGDEF domain similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 456.0
  • Bit_score: 429
  • Evalue 1.50e-117

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1929
CACGACGTCTCGGTCCAGAGCCTGATCGACCGTACCGCCGATAACGATGGCGCCGGCGTGCAGCTGGTCATGGGCGCGGACGGTGCGCTGATCGCGCATCCGCAACTCAGCCAGCGCATCGCCGCCGCCGATGGCCAACTGGAACTGTCGGCCCTGGACGACCCGCTGCTGGCGCAGGTGCACGGCATGATCGCCTACGGCCATGCCGACAACGGGATCGGCCGCTCGCCGGACGGCAGCCACTGGGTGGCGTGGTCGAAGATCCACGGTCCGGGCTGGTACCAGGTGTTCCTGCTGCCGCAGGCACGGGTGGACCAGGTGCTGATGTGGGGCCTGCTGGCCGTCTCCAGCTTCGGCATCCTCGGCCTGCTGCCGGCGATGTGGCTGCTGCGCCGCCGGGTGGGTTCGCTGTTCGCGGTACCGCTGAAGCGCCTGACCCAGGCGGTGGACGAACTCAGCCAGGGCGGCGAGCCCAAGCCGATCGCGATGCAGGGCGACGACGAGCTCGGGCACCTGGCCGGCGCGTTCGACGACATGGTCGAGGAACTGGTGCAGCAGCGCGCCCTGCAGTTCGCGCACGCGCAGGCGCTGCAGACCGAGATCGACGAGCGCCGCCAGTTCATGACCCGGCTGGAGGAGGAGCGCGCGCGCCTGCTGGCCCTGCTCGGCGCGATGAACCTGGGCATCCTGTTCGTCAGCGACGAGAACCGCGCGACCTACTGCAATGCCGCCTTCCTCGCCATGTGGGATTTCCCGGAGGGCAATACCGTCGTCGGCAGCACCACCGACCAGTGGCTGGAAAGCTCGCAGCGGCTGATGCTCGACCCGCCGGCGTTCCGCCGGCACCTGGACGAGGCGGCCGTCGCCCCCAACCTGCACAAGCGGCTGGAAATCCGCCTGCACGACGGGCGCATCGTCATGCACGACGCCTACCCGGTGCGCGACGCGCAGGACCACCTCATAGGCCGGCTGTGGGTGCAGGAAGACATCACCCACGAACGCCAGACCGCCGAGCAGCTGGTGCGGCTGGCCCAGCACGATCCGCTGACCGGCCTGTACAACCGGCGCCGTTTCGAGGACGACCTGGCGCACTTCTTCCATGCCGCCGAACGCACGCCGAGCCAGGCCGCGCTGCTGTTCTTCGACCTGGACGAGTTCAAGTACATCAACGACACCTTCGGCCATCGCGCCGGCGACTCGGTCCTCAACCGCATGGCGGTCGAGATCCGCACCCTGGTGCGCAGCGGCGAGACCCTGTTCCGGCTCGGCGGCGACGAGTTCGCCGTGCTGATGCCGCATGCGAGCCTGGATGACGCCCAGCACCTGGCCGAACGCATCGTGCTGCGGATCTCGCAGACGCCGCTGTGCCTGCACGAACACACCGTGCGCCTGACCACCAGCCTGGGCATCGCCCACTTCCCGGCCCATGCCGACAACGCCGAGGACCTGGTGGCCCACGCCGACGCGGCGATGTACCAGGCCAAGCACACCGGCAAGAACCGCTGGAACGTGTACCGTCCGGACCGCGACAGCTCGCGGGAAATGGCAAGCCGGCTGGCCTGGAACGACCGCATCGCGCGGGCCCTGGAACACGACCTGCTGCGCCTGCATTTCCAGGGCGTGCACCATGCCGCCGACGGCCGCCTGGCGCACCTGGAGGCGCTGATCCGGATGGAGGACGAGGCCAACCCCGGCCAGCTGATCATGCCGGCGCAGTTCGTCGAACCTGCCGAAAAGAGCGGCAAGATCCTGGAGATCGACCGCTGGGTGATCGGCCGCAGCATCAGCCTGCTGGCCACTCACCCCAACCTGCCGGCCATCGCCGTCAACATTTCCGGGCGCTCGTTCGACGACCCCGAGGCCGTGGTGCGTCTGTGCTGGCGCGGGGTACGCCCGATCAATCTGCCCGCGCCGGTGAAATACCTGCAC
PROTEIN sequence
Length: 643
HDVSVQSLIDRTADNDGAGVQLVMGADGALIAHPQLSQRIAAADGQLELSALDDPLLAQVHGMIAYGHADNGIGRSPDGSHWVAWSKIHGPGWYQVFLLPQARVDQVLMWGLLAVSSFGILGLLPAMWLLRRRVGSLFAVPLKRLTQAVDELSQGGEPKPIAMQGDDELGHLAGAFDDMVEELVQQRALQFAHAQALQTEIDERRQFMTRLEEERARLLALLGAMNLGILFVSDENRATYCNAAFLAMWDFPEGNTVVGSTTDQWLESSQRLMLDPPAFRRHLDEAAVAPNLHKRLEIRLHDGRIVMHDAYPVRDAQDHLIGRLWVQEDITHERQTAEQLVRLAQHDPLTGLYNRRRFEDDLAHFFHAAERTPSQAALLFFDLDEFKYINDTFGHRAGDSVLNRMAVEIRTLVRSGETLFRLGGDEFAVLMPHASLDDAQHLAERIVLRISQTPLCLHEHTVRLTTSLGIAHFPAHADNAEDLVAHADAAMYQAKHTGKNRWNVYRPDRDSSREMASRLAWNDRIARALEHDLLRLHFQGVHHAADGRLAHLEALIRMEDEANPGQLIMPAQFVEPAEKSGKILEIDRWVIGRSISLLATHPNLPAIAVNISGRSFDDPEAVVRLCWRGVRPINLPAPVKYLH