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SCN18_10_11_15_R1_P_scaffold_8127_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(2..385)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide core oligosaccharide biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KMB3_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 128.0
  • Bit_score: 231
  • Evalue 3.30e-58
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 128.0
  • Bit_score: 231
  • Evalue 1.20e-58
Lipopolysaccharide core oligosaccharide biosynthesis protein {ECO:0000313|EMBL:EQM80594.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 128.0
  • Bit_score: 231
  • Evalue 4.70e-58

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGATCACGGTCTCCCCGGAAAACTTTGAAAGCCAGATCGCCTGGCTGGCCGCCGATGGCTGGACCTCGCTGACCATGCAGCAGTACGCCGGCTTCCTGGCCGGCGCGCCGGTGCCGCGCAAATCCATCCTCATCACCTTCGACGACGGCTACCTGGACAACTGGGTGCATGCCCACCCCATCCTGCAGAAGTACGGCATGCACGCGGTGGTGTTCCTGGTCACCGGCTGGATGGGCCAGGGCGACGTGCGCCCGCACGCGGGCCAAGGGGATGCGCCGCTGCCCGCCACGCCGGACCACCGCGGCTGCGAGGATGCGATCTTCAACCAGGGCCGCGCCGACGAAGTGATGATGCGCTGGAGCGAAGCGCGCGCGGCCATCGCC
PROTEIN sequence
Length: 128
MITVSPENFESQIAWLAADGWTSLTMQQYAGFLAGAPVPRKSILITFDDGYLDNWVHAHPILQKYGMHAVVFLVTGWMGQGDVRPHAGQGDAPLPATPDHRGCEDAIFNQGRADEVMMRWSEARAAIA