ggKbase home page

SCN18_10_11_15_R1_P_scaffold_9617_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 3..794

Top 3 Functional Annotations

Value Algorithm Source
deoxyribodipyrimidine photo-lyase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031D3722 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 259.0
  • Bit_score: 423
  • Evalue 9.40e-116
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AKC86591.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 256.0
  • Bit_score: 450
  • Evalue 1.00e-123
DNA photolyase FAD-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 261.0
  • Bit_score: 416
  • Evalue 3.20e-114

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
CACGCTTTTCTCGACGGCGCGGTACACGGCTACGCGCAGGGCCGCGATTTCGCCGCGCAGGCCGGCACCTCGCGGCTGTCGCCGCACCTGCATCACGGCGAGCTGTCGGTACGGCGGATCGCCGCGGCGGTGCTGGCCGCCGGCGACGCCATCGCCGAGGCCGCCCGCGACCGCTTCCTCGCCGAACTGGGCTGGCGCGAATTCGCCCATCATGTGCTGCACCACTACCCGCGGGTTCCTGACCACAACCTCGACCCGCGCTTCGACGATTTCCCGTGGGCGCCGCCGGATGAGGTGCTGCTGGACGCCTGGCGGCAGGGGCGCACCGGCGTGCCCATCGTCGATGCCGGCATGCGTGAGCTGTGGCACACCGGCTGGATGCACAACCGCGTGCGCATGGTGGTGGCCAGCTGGCTGACCAAGCACCTGCGCCAGCACTGGCTGCACGGCGCGCGCTGGTTCTGGGACACGCTGGTGGATGCCGACCTGGCCAACAACACCCAGGGGTGGCAGTGGACCGCCGGTACCGGCGCCGACGCGGCGCCGTACTTCCGCGTGTTCAATCCGGTCAGCCAGGCGCGGCGGTTCGACCCGGATGGCGCCTATGTCGCGCGCTGGGTGCCGGAGCTGGCGGGCCTGCCGCTGCCGGCGCGTTTCGCGCCGTGGGAGCATCCTGAACTGGCGCGCCGGCTGGCGCCGGGCTACCCGGCACGGCCGCAGGTGGAGCTGGCCGCGGGCCGGGAGGGGGCATTGGCCGCCTTCGCCACGCTGCGTCGCGGGCGTGCGGACTGA
PROTEIN sequence
Length: 264
HAFLDGAVHGYAQGRDFAAQAGTSRLSPHLHHGELSVRRIAAAVLAAGDAIAEAARDRFLAELGWREFAHHVLHHYPRVPDHNLDPRFDDFPWAPPDEVLLDAWRQGRTGVPIVDAGMRELWHTGWMHNRVRMVVASWLTKHLRQHWLHGARWFWDTLVDADLANNTQGWQWTAGTGADAAPYFRVFNPVSQARRFDPDGAYVARWVPELAGLPLPARFAPWEHPELARRLAPGYPARPQVELAAGREGALAAFATLRRGRAD*