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SCN18_10_11_15_R1_P_scaffold_9863_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 140..424

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0CAT6_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 88.0
  • Bit_score: 142
  • Evalue 1.50e-31
Helix-turn-helix protein {ECO:0000313|EMBL:EGD17360.1}; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.0
  • Coverage: 88.0
  • Bit_score: 142
  • Evalue 2.10e-31
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 89.0
  • Bit_score: 100
  • Evalue 1.80e-19

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
TTGTCTGAGAAAAAAGAGCTCCCCGTCTACAGCGTGCGTCTGCGCGAAGCGCGGGAGACCTATGGCATTTCGCAGCGCAATCTCGGCATCAAGGCCGGACTGGACGATTTCGTCGCCAGCACCCGCATCAACCGCTATGAAACCGGCGTGCACCAGCCCGATCTGCAGATCCTGCAGCGCATCGCCGATGTCTTCGACGTGCCGGTGGCCTACTTCTTCGCCGAGGACGATGAACTGGCGGAGATGATCAAGAATTTCCGGCGCGGCAGGCAGCGCAAAAGCTGA
PROTEIN sequence
Length: 95
LSEKKELPVYSVRLREARETYGISQRNLGIKAGLDDFVASTRINRYETGVHQPDLQILQRIADVFDVPVAYFFAEDDELAEMIKNFRRGRQRKS*