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SCN18_10_11_15_R1_P_scaffold_3080_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(639..1490)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 281.0
  • Bit_score: 461
  • Evalue 8.00e-127
diaminopimelate epimerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000364433F similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 282.0
  • Bit_score: 463
  • Evalue 8.80e-128
dapF; diaminopimelate epimerase similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 276.0
  • Bit_score: 457
  • Evalue 1.80e-126

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGAATAGGCCGGCGGCACCGCGCCTGCGTTTCACCAAGATGCATGGCGCCGGCAACGATTTCGTGGTGCTGGACCTGCGCGACGGTACGCCGCCGCCGGATGTGGACCTGGCCGCGCGCATCGCCGACCGGCATCGCGGCGTCGGCTGCGACCAGATCCTGACCATCGAGCCGCCGCGCGATGCCGCTTCGGTGGCGTCCTATCGCATCTGGAACTCCGACGGCTCCACCTCGCAGCAGTGCGGCAACGGCGCGCGCTGCGTGGCCGCCTGGCTGGTGCGCGACGGCGCGGCGCAGGGCGATGAATTCCTGATCGACAGCCCGCTGCGCACGCATGCGGTGCGCCGGCTGGACGGCGGGCATTACGCCGTGGCGATGGGGCAGCCGGAATTCGAACCGGCGCAGATCCCGCTGATCGGTTTCCCGCGCGCCCGCGACGAATACGTGGTGCCGCTGCAGGGCGAGAACGTTCGCTTCGGTGCGGTATCGATGGGCAACCCGCACGCGGTGCTGGAGGTCGGCCTGATCGACGCGGCGCCGGTGGAGCGGATGGGGCCGCTGCTGCAGCAGCACGCTTCGTTCCCGGAGTCGGTGAACGTCGGTTTCGCCCAGGTGCTGGACAATGGCCACGTGCGCCTGCGCGTGTTCGAGCGTGGCGTCGGCGAAACCCTGGCCTGCGGCAGCGGCGCCTGCGCCGCGGCGGTGGTGCTGATGCAGCGCGGCCGGCTGGCGCGCGACGCGGTGGTGTCGCTGCCCGGCGGCGACCTGCGCATCCAATGGCCGGCCGACGAAGCGCAGATCGTGATGTCCGGCCCGGCGGCCTTCGTATTCGATGGAGAGTGGATGGGATGA
PROTEIN sequence
Length: 284
MNRPAAPRLRFTKMHGAGNDFVVLDLRDGTPPPDVDLAARIADRHRGVGCDQILTIEPPRDAASVASYRIWNSDGSTSQQCGNGARCVAAWLVRDGAAQGDEFLIDSPLRTHAVRRLDGGHYAVAMGQPEFEPAQIPLIGFPRARDEYVVPLQGENVRFGAVSMGNPHAVLEVGLIDAAPVERMGPLLQQHASFPESVNVGFAQVLDNGHVRLRVFERGVGETLACGSGACAAAVVLMQRGRLARDAVVSLPGGDLRIQWPADEAQIVMSGPAAFVFDGEWMG*