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SCN18_10_11_15_R1_P_scaffold_3088_3

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 1107..2129

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F3F5A7 similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 340.0
  • Bit_score: 525
  • Evalue 3.00e-146
LysR family transcriptional regulator {ECO:0000313|EMBL:AHY59403.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 340.0
  • Bit_score: 520
  • Evalue 1.70e-144
smeRv; LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 341.0
  • Bit_score: 518
  • Evalue 1.30e-144

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGGCCAACGATCTCAACGACACCCTGATCTTCGTCAAGGTGGTCGAACAGGGCAGCTTCACCGCCGCCGCACGCCTGCTCGGGCACCCCAAGACCACGGTCAGCCGCAAGGTGCAGGAACTGGAGGAACGGCTCGGCGCGCGCCTGCTGCACCGGACCACGCGCCGGCTGGGGCTGACCGAAGCCGGCACCGTCTATTACGAACACTGCCAGCGCATCGCCCGCGAACTCGAACAGGCCGAGAGCGCGGTCAGCCAGCTGCAGTCCGGGCCGCGCGGCTGGCTGCGCTTCACCGTGCCGTACTCGGTGGGCATCAACTGGATCGCGCCGCTGCTGGGACAGTTCCAGGCGCAGTACCCGGAGATCCGCGTGGACATGCACCTGGGCAACGAGATGCTCGACCTGATCTCCGGCGAGACCGACCTGGCACTGCGCGTCGGCCCGCTGCCCGACTCCAACCTGATCGCGCGCAAGCTCGGCAGCCTGCGTACCCAGGTATTCGCCAGCCCTGCCTACCTCCAGCGCCACGGCGAACCGCGGCATCCGGACGAACTGCAGCATCACCGTACGCTGGCGCTGCGCAAGCACCAGCAGGGCCAGAACAACCGATTCGCCTGGTCGCTGGCCGAAGACGGCGGGCAGATGCGCGAGTTCCCGGTCAATCCGCTGATGGTGGCCCACGACACCGCCGCGCTGAACTCGATGCTGGTCGGTGGCGAGGGGCTGATGCTCAGCAGCGACGTGATGGCCAAGCCGTTCGTCGAGTCGGGCATGCTGCGCCGGGTGCTGGCCGGCTGGACCGGCCCGGACTACGACTTCAGCGCGGTGTTCGCCGGCGGCGGCATGGTCTCGCCCAAGGTGCGCGCCTTCGTCGATTTCCTGGTGGAGAAACTCAACCTGGACGCCAACTACATGCTGCTGCAGTGCCCCAACGCCAAGCATCTGGCCGACCACGAACCGTCGTACTGCCAGCGCGGCCTGGAGGTGCCCGAACTGCGGGTGCTCGAGGCGCTCAGCGCCTGA
PROTEIN sequence
Length: 341
MANDLNDTLIFVKVVEQGSFTAAARLLGHPKTTVSRKVQELEERLGARLLHRTTRRLGLTEAGTVYYEHCQRIARELEQAESAVSQLQSGPRGWLRFTVPYSVGINWIAPLLGQFQAQYPEIRVDMHLGNEMLDLISGETDLALRVGPLPDSNLIARKLGSLRTQVFASPAYLQRHGEPRHPDELQHHRTLALRKHQQGQNNRFAWSLAEDGGQMREFPVNPLMVAHDTAALNSMLVGGEGLMLSSDVMAKPFVESGMLRRVLAGWTGPDYDFSAVFAGGGMVSPKVRAFVDFLVEKLNLDANYMLLQCPNAKHLADHEPSYCQRGLEVPELRVLEALSA*