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SCN18_10_11_15_R1_P_scaffold_3119_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(632..1993)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 454.0
  • Bit_score: 800
  • Evalue 6.80e-229
ribosomal protein S12 methylthiotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000302A4C2 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 454.0
  • Bit_score: 797
  • Evalue 5.40e-228
30S ribosomal protein S12 methylthiotransferase RimO similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 453.0
  • Bit_score: 792
  • Evalue 4.90e-227

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGTCCCAGCTGAACCCCAAAGTCGGCTTCGTCAGCCTTGGCTGCCCGAAGGCCCTCGTCGATTCCGAGCGCATCCTCACCCAGTTGCGGGTGGAGGGCTACGACATCGTGCCGTCCTACGACTCGGCCGACGTGGTGGTGGTCAACACCTGCGGCTTCATCGACTCGGCGGTGGCCGAATCGCTGGACGCCATCGGCGAGGCGATGAACGAGAACGGCAAGGTCATCGTCACCGGCTGCCTGGGCAAGAAGTCGGAGATGATCCGCGAGCAGTACCCGGACGTGCTGTCGGTATCCGGGCCGCAGGACTACACCAGCGTGATGGATGCGGTGCACGCGGCGCTGCCGCCGAAGCACGACCCGTTCGTGGATCTGGTGCCGGACTACGGCATCAAGCTGACGCCGCGCCACTATGCCTACCTGAAGATTTCCGAGGGCTGCAACCACCGTTGCAGCTTCTGCATCATCCCCTCGATGCGCGGCGACCTGGTGTCGCGCCCGGTCGAGGACGTGCTGCGCGAGGCCGAGCGCCTGGTGAAGGGCGGCGTGCGCGAACTGCTGGTGGTGTCGCAGGACACCTCGGCCTATGGCGTGGACCGCCGGTATGCGCCAGGCACCTGGCGTGGCAGGGAATACGCCACGCGCATGAAGGCGCTGTGCGAGGGCCTGTCCGAGCTGGATGCATGGACGCGCCTGCATTACGTCTATCCGTATCCGCATGTGGACGATGTCGTGCCGCTGATGGCCGAAGGGAAAATCCTGCCGTACCTGGACATCCCGTTCCAGCATGCCAGCCCGCGCATCCTCAAGCTGATGAAGCGCCCGGGCGCGGTCGACAAGACCCTGGAGCGGGTACTGCGCTGGCGCGACATCAGCCCGGACATCACCGTGCGCTCGACCTTCATCGTCGGCTTCCCGGGCGAGACCGAGGCCGAGTTCGAACAGCTGCTCGACTTCCTCGATGCCGCCCAGCTGGATCGCGTGGGCGCGTTCGCCTATTCGCCGGTGCAGGGCGCCACCGCCAACGACCTGCCCGATCCGGTGCCGGAAGAGGTGAAGCAGGAGCGCCTGGCACGCTTCATGGAGAAGCAGGCCGCCATTTCCGCCGCCAGGCTCGAAGCGAAGATCGGCAGCGTGCAGCAATGCCTGGTGGACGCCCTCGAGGACGGCATCGCGGTGGCGCGCTCCAAGGCCGACGCCCCCGAGATCGACGGCCTGGTGCATATCCAGAATGCCGATGAGGCCCGGCTGCGGGTAGGCGATTTCGTCGATGTGGAAATCACCGACAGCGATGAGCACGACCTGTTCGGTGACGCGCTGGTCAAGCCGGTCGCCCAGCCGTTCGACCTCAAGGTGCTGTGA
PROTEIN sequence
Length: 454
MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDSADVVVVNTCGFIDSAVAESLDAIGEAMNENGKVIVTGCLGKKSEMIREQYPDVLSVSGPQDYTSVMDAVHAALPPKHDPFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVEDVLREAERLVKGGVRELLVVSQDTSAYGVDRRYAPGTWRGREYATRMKALCEGLSELDAWTRLHYVYPYPHVDDVVPLMAEGKILPYLDIPFQHASPRILKLMKRPGAVDKTLERVLRWRDISPDITVRSTFIVGFPGETEAEFEQLLDFLDAAQLDRVGAFAYSPVQGATANDLPDPVPEEVKQERLARFMEKQAAISAARLEAKIGSVQQCLVDALEDGIAVARSKADAPEIDGLVHIQNADEARLRVGDFVDVEITDSDEHDLFGDALVKPVAQPFDLKVL*