ggKbase home page

SCN18_10_11_15_R1_P_scaffold_9185_1

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(2..925)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 305.0
  • Bit_score: 432
  • Evalue 4.30e-118
ATP-binding protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B153 similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 305.0
  • Bit_score: 430
  • Evalue 1.20e-117
lipid transporter ATP-binding/permease similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 305.0
  • Bit_score: 432
  • Evalue 8.70e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGAGCGGGCACGCCACTCCCTGGCAGACATACCGGCGCCTGCTCGGGTTCGCCAAGCCCTACCGTGGATTGCTGCTGGTGGCCGCGCTGGGCATGCTGATCGAAGCGCTGGCCGGTGGCGGCTTCCTCCTGCTGATGAGCCCCATCACCAACAACCTGGTGAATCCGGAGGACATCAATTGGTGGATGCCCATGGCGATCGTGGGCCTGTTCCTGCTGCGAGGAGTGGCGGGCTACCTGACCGACATCGGCATGGGCAAGGCCGCGCGCAGCATCGCCCGCGACCTGCGCGTGCAGGTGCTGGGCAAATACCTGCGCCTGCCCGGCCTGCAGTTCGATGCCGAGCCGGTGCCGTCGATGCTGGTGCGGCTGGGCTCGGACAGCGACCAGGTGGCACAGGCGGCCGTCGACGCGATGAAGGTGGTGTTGCAGCAGTCCCTGCAGGTGCTGGTCTCGCTGGCGACGATGCTGTGGTACAGCTGGCAGGTGACACTGGCCATCTTCGTGCTGGCGCCGCCGCTGGCCTGGGTGATGAACAAGGTCGCCAAGCGCTATCGCCGGATCAGCCATCGCATCCAGGAAAGTGGCGCCGAACTGCTGCAGGCTGCGGACCAGACGCTGTCCAGCCAGCAGGAAGTCAAGATCTACGGTGCGCAGCGCAGCGAACTGGAACGCTACGGCGCGTTGGCCGACACCAACCTGAAGCTGGCGATGAAGGTCGAGGCCACGCGCAGCATTTCCTCGGCGATGGTGCAGCTGATCGGCGCGGTCGGATTGGCGGCGCTGCTGCTGATCGCCGGCCATGAAGCGGCGGCTGGGCGTTTGTCCGTGGGGCATTTCGTCTCGATGATGCTGGCGATGATGACTGTCATCCCCGCGCTCAAGCAGCTCACCAATGTGCAGAACATGACCCAGCGCGGCATC
PROTEIN sequence
Length: 308
MSGHATPWQTYRRLLGFAKPYRGLLLVAALGMLIEALAGGGFLLLMSPITNNLVNPEDINWWMPMAIVGLFLLRGVAGYLTDIGMGKAARSIARDLRVQVLGKYLRLPGLQFDAEPVPSMLVRLGSDSDQVAQAAVDAMKVVLQQSLQVLVSLATMLWYSWQVTLAIFVLAPPLAWVMNKVAKRYRRISHRIQESGAELLQAADQTLSSQQEVKIYGAQRSELERYGALADTNLKLAMKVEATRSISSAMVQLIGAVGLAALLLIAGHEAAAGRLSVGHFVSMMLAMMTVIPALKQLTNVQNMTQRGI