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SCN18_10_11_15_R1_P_scaffold_9403_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(500..1177)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide core oligosaccharide biosynthesis protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000309A7DD similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 225.0
  • Bit_score: 380
  • Evalue 5.90e-103
Uncharacterized protein {ECO:0000313|EMBL:AHY58297.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 225.0
  • Bit_score: 384
  • Evalue 5.80e-104
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 226.0
  • Bit_score: 373
  • Evalue 2.70e-101

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
CGCAAATCGATCCTGATCACCTTCGACGACGGCTACCTGGACAACTGGGTCTACGCCCACCCCATCCTGCAGAAGTACGGCATGCGCGCGGTGGTGTTCCTGGTCACCGGCTGGATGGGCCAGGGCGAGGTACGGCCGCACGCCGGCCAGCAGGGCGCGGCATTGCCGCCCACGCCGGACCACCGCGGCTGCGAGGATGCGATCTTCCGCCTGGACCGCGCCGACGAGGTGATGATGCGCTGGAGCGAGGCGCGCGCGGCCATCGCCGCCGGCACCTTCGAAATGCACTGCCATACCCATACGCATACCCGCTGGCTGCGCCGGGAGATCAGCCGCGAGGAGAAATGCGCGGGCATCCGCGACGACCTGGTCCGGGCACGCGAAGAACTGCGCAGGGAACTGGGCGAAGCTTCCGACACCCTGTGCTGGCCCTATGGCGATTTCGACGAGGACTACGTGCGGATCGCGCGCGAACTCGGCTTCCGCTACCTGCACACCACCCATCCGTTCGGCCGCAACCTGGTGGGCGGCGATCCGGAGCACATCTACCGTTTCGCGATCCGCAACCGCCCCGCGAAGTGGCTGCGCAAGCGCATCGCCAGCAGCTACAACCCGGTGATCGCGCCGCTGTTCAACCGGTTCAAGGCGCACCGCCGGGGCATGGTCGCCGGGCCGTGA
PROTEIN sequence
Length: 226
RKSILITFDDGYLDNWVYAHPILQKYGMRAVVFLVTGWMGQGEVRPHAGQQGAALPPTPDHRGCEDAIFRLDRADEVMMRWSEARAAIAAGTFEMHCHTHTHTRWLRREISREEKCAGIRDDLVRAREELRRELGEASDTLCWPYGDFDEDYVRIARELGFRYLHTTHPFGRNLVGGDPEHIYRFAIRNRPAKWLRKRIASSYNPVIAPLFNRFKAHRRGMVAGP*