ggKbase home page

SCN18_10_11_15_R1_P_scaffold_8673_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 350..703

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly PilZ n=5 Tax=Stenotrophomonas maltophilia RepID=G0K0C4_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 117.0
  • Bit_score: 213
  • Evalue 1.10e-52
pilZ; type IV pilus assembly protein PilZ similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 117.0
  • Bit_score: 213
  • Evalue 3.20e-53
Pilus assembly protein PilZ {ECO:0000313|EMBL:KDE90454.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 117.0
  • Bit_score: 213
  • Evalue 1.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
ATGAGTGCGACGAACGCGCGCCAGGGCATTCTTTCCCTGGCGGTCAAGGACAAGGCCGCGCTGTACAGCGCCTACATGCCGTTCGTGAAGAACGGTGGCGTGTTCGTGCCCACGCCCAAGCGCTATTTCGTGGGCGACGAAGTGTTCGTGCTGCTGACCCTGCCCGATTCCAGCGAGCGCCTGCCGGTGGCCGGCAAGGTGGTCTGGGTCACGCCGCTGGGCGCGCAGGGCAACCGCCAGGCCGGGATCGGCGTGCAGTTGGCCGACGGTGCCGATGGCGAGGCCATCCGCGGCCGCATCGAGACCCTGCTGGCCGGCACCGCCGGTTCGGACAAGCCGACCCACACCATGTAA
PROTEIN sequence
Length: 118
MSATNARQGILSLAVKDKAALYSAYMPFVKNGGVFVPTPKRYFVGDEVFVLLTLPDSSERLPVAGKVVWVTPLGAQGNRQAGIGVQLADGADGEAIRGRIETLLAGTAGSDKPTHTM*