ggKbase home page

SCN18_10_11_15_R1_P_scaffold_8934_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(344..613)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003043CD4 similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 89.0
  • Bit_score: 157
  • Evalue 5.50e-36
Membrane protein {ECO:0000313|EMBL:AHY59966.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 87.0
  • Bit_score: 158
  • Evalue 3.50e-36
transglycosylase-associated protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 89.0
  • Bit_score: 155
  • Evalue 4.60e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
ATGAGCGGATTGTTTGGCAGCGACAGCTGGCTGTACATCATCCTGGTCGGCTTCGTGGTCGGCCTGCTCGGGCGCTTCTTCATGCCCGGCAACAACCGCATGGGCTGCCTGCTGACCATCGTGCTGGGCATTGCCGGCGCGGTGTCCGCCGGCTGGTTCGGCCGCGAAATGGGCTGGTACGCGGCCGGGCAACCGGCAGGCTTCGTCGGCGCCATCATCGGCGCCATCGCCCTGCTCGCGCTGTTGCGGCTGGTCAGCGGCAAGCGCTGA
PROTEIN sequence
Length: 90
MSGLFGSDSWLYIILVGFVVGLLGRFFMPGNNRMGCLLTIVLGIAGAVSAGWFGREMGWYAAGQPAGFVGAIIGAIALLALLRLVSGKR*