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SCN18_10_11_15_R1_P_scaffold_11243_2

Organism: SCN18_10_11_15_R1_P_Stenotrophomonas_69_7

near complete RP 45 / 55 MC: 3 BSCG 42 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(761..1033)

Top 3 Functional Annotations

Value Algorithm Source
Virulence protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZF91_9XANT similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 82.0
  • Bit_score: 134
  • Evalue 3.90e-29
Virulence protein {ECO:0000313|EMBL:ETC88992.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 82.0
  • Bit_score: 134
  • Evalue 5.40e-29
Type IV secretory pathway, VirJ component similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 82.0
  • Bit_score: 129
  • Evalue 3.50e-28

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
TACGAGTTCCACGTCAGCAACTGGCTGGGCGGCGATGGCGACGGCTTGCCGATCGCCCCGGAGATGCGCCGGCTGCCGGCGGCGCGCACGGTCTGCGTGTACGGCCAGGACGACGACGATGCGCTGTGCCCGCGGTTGCCGGCCGGTTCGGCGCAGGTCGTGCGCATGCCCGGCGACCATCATTTCCAGGGCGACTATGCCGGGCTGGCGCGGGTGATCCTGCAGCGGCTGCGCGGGCTCAGCTCGACTGCCGGCGCGGGTCCAGCGAAATGA
PROTEIN sequence
Length: 91
YEFHVSNWLGGDGDGLPIAPEMRRLPAARTVCVYGQDDDDALCPRLPAGSAQVVRMPGDHHFQGDYAGLARVILQRLRGLSSTAGAGPAK*