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SCN18_13_7_16_R2_B_scaffold_3355_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(1825..2883)

Top 3 Functional Annotations

Value Algorithm Source
putative geranylgeranyl pyrophosphate synthase (EC:2.5.1.1) similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 352.0
  • Bit_score: 294
  • Evalue 2.50e-77
Putative geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:AHH94054.1}; EC=2.5.1.1 {ECO:0000313|EMBL:AHH94054.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 352.0
  • Bit_score: 294
  • Evalue 1.20e-76
dimethylallyltranstransferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4E314 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 331.0
  • Bit_score: 331
  • Evalue 6.50e-88

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
ATGAGTACGGTTGATGACGTGGCAACCACAGCCGCCACTCAGGCGCGACCGGAGGTCCCAGCGGCGGTCGAACGGGTGCGCGGACTGGTCGAGCCGGCCATGCGGGCCGCGGTGGAGTCGATCCCTGATCAGCGGATGCGGTTGATCGCCGCCTATCAGTTGGGCTGGTGCGACGCCGAGGGTCAGCCGACACGCGCCGGTGGCAAGGCCATCCGTCCGACGCTCGCGGTGCTCGCCGCGGAGGCGGTCGGGGGCGAGTCGGCGGCTGGTGTGCCGGTCGCGGCCGCGGTCGAGCTGGTGCACAACTTCTCGCTGCTGCACGACGACATCATGGATCGCGACGTCGAGCGCCGGCACCGGCCCACGGGCTGGGTGGCCTTCGGTGAGGGGCAGGCGATCCTCGCCGGCAACGCGATGCTCGCGGCGGCGATCGAGATCGTCCTGCGCGACAGCCCGCACGCCGAGCGGGTCCTGCCCGAGCTGCTCAGCACGGTCCAGCTGCTCATCGGCGGGCAGTCCGAGGATCTCGCGCTGGAGCAGCGCGACGACGCCACGGTGGCCGAGGTCCTCGCGATGGAGGCCGGCAAGACCGGTGCGTTGATCGCCGGCTCGCTGGCCGGTGGCGCTCTCGCCGCGGGTGCCGACGCCGACGCCGTCGCGCGTCTGGCCGAGGCCGGTCGTCAGCTGGGGCAGGCGTTCCAGCTCGTCGACGACCTGCTCGGCATCGTCGGCGACCCGGCCGTCACCGGTAAGTCGGCCTCCTCCGACGTGCGCGCCGGCAAGCGCAGCGCACCGGTGGTCGCGGCCCTGCGGTCGCAGACCTCGGCCGGCGCGGATCTCGCCGCGCTGCTCGCCGACGGCCCGCCCGAGTCGGACGAGGACGTCGCCCGCGCGGTCGAGCTGATCGTGGCCGCCGGGGGAGTGCAGTGTGCGGCCGACGACGCCCAACGGCTGCTCGACTCAGCGCTGACCGAGCTCGAAGCCGCGGTCGGGGCCGACGGCGGCGCGGTCGCCGAGTTGCAGGAGATGGCGCGCTTCCTGGTCCACCGGGTCTGGTGA
PROTEIN sequence
Length: 353
MSTVDDVATTAATQARPEVPAAVERVRGLVEPAMRAAVESIPDQRMRLIAAYQLGWCDAEGQPTRAGGKAIRPTLAVLAAEAVGGESAAGVPVAAAVELVHNFSLLHDDIMDRDVERRHRPTGWVAFGEGQAILAGNAMLAAAIEIVLRDSPHAERVLPELLSTVQLLIGGQSEDLALEQRDDATVAEVLAMEAGKTGALIAGSLAGGALAAGADADAVARLAEAGRQLGQAFQLVDDLLGIVGDPAVTGKSASSDVRAGKRSAPVVAALRSQTSAGADLAALLADGPPESDEDVARAVELIVAAGGVQCAADDAQRLLDSALTELEAAVGADGGAVAELQEMARFLVHRVW*