ggKbase home page

SCN18_13_7_16_R2_B_scaffold_3355_4

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(4240..4689)

Top 3 Functional Annotations

Value Algorithm Source
phytoene synthase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B34C0D similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 144.0
  • Bit_score: 170
  • Evalue 8.10e-40
squalene synthase HpnD similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 141.0
  • Bit_score: 152
  • Evalue 6.50e-35
Squalene synthase HpnD {ECO:0000313|EMBL:AIJ24172.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 141.0
  • Bit_score: 152
  • Evalue 3.20e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 450
CTGCCTTCGGCCGACTCGGCGGAGGTGGCACGGCTGGCCGACGAACTCGGCGTCGGGCTGCAGCTCACCAACATCCTGCGCGACATCCGCGAGGACCTGCTCAACGATCGTGTCTACCTGCCGGCCAAGGACCTCGAGCTCTTCGGCGTCGAGTTGCGCATCGGCGCTGACGGCGCGCTCGACCCGTGCGGTGGCCGGCTGGCCGAACTGATCCGCTTCGAGGCCGCGCGGGCCTGGGGCTGGTACGACCGCGGCCTGAAGCTGCTCGACGTCCTCGACCGGCGTAGTGCCGCGTGCTGCGCGGCCATGGCCGGGATCTACCACGAGCTGCTGCGCCGCATCGCCGCCGATCCGAGCCAGGTCATGGCCGCGCGCATGTCGTTGCCGGCCACGGTCAAGCTGCGCGTCGCCGTCGGTGCGCTGGCCGGCGGGGGGCGCTCGCGTGGCTGA
PROTEIN sequence
Length: 150
LPSADSAEVARLADELGVGLQLTNILRDIREDLLNDRVYLPAKDLELFGVELRIGADGALDPCGGRLAELIRFEAARAWGWYDRGLKLLDVLDRRSAACCAAMAGIYHELLRRIAADPSQVMAARMSLPATVKLRVAVGALAGGGRSRG*