ggKbase home page

SCN18_13_7_16_R2_B_scaffold_3424_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 1208..1768

Top 3 Functional Annotations

Value Algorithm Source
Isochorismatase hydrolase n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J475_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 186.0
  • Bit_score: 263
  • Evalue 1.50e-67
isochorismatase hydrolase similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 186.0
  • Bit_score: 263
  • Evalue 4.20e-68
Isochorismatase hydrolase {ECO:0000313|EMBL:ADP81854.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 186.0
  • Bit_score: 263
  • Evalue 2.10e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCCGATCGCAAGACCGCCCTGCTCGTCATGGACTTCCAGCCCGGCATCGTCGCCCGCCTCGCCGACGAGGCCGTGCTCGACGCCGCCACCCGCGCCGTGGACGCGGCCCGCGGCGCCGGCGTGCCGGTGTTCTTCGTGCGGGTCGCGTTCCGGCCCGGCTTCCCGGAGGCGGGCGAGCGCAACGCCGCGTTCCGGGCCGTCGCCCAGGCCGGCGACGCGATGACCCAGGACCACCCGGCCACCCAGGTGCACGACGCGTTCAAGCCCCGGCCGGACGAGCCCGTCGTCGTGAAGCGCCGGGTGAGCGCCTTCAGCGGCAGCGACCTCGAGGTCCTGCTGCGGGCCGCGGAGGCCGACAGCCTCGTGCTCGCCGGCATCTCGACCAGCGGCGTCGTGCTCTCCACCCTGCGCCAGGCCGCCGACCTCGACTACCGCCTCACCGTCCTCGCCGATGCCTGCGGCGACCTCGACCCCGACGTGCACCGCGTCCTGACCGAGAAGGTCTTTCCTCGGCAGGCCGTCGTCACGACGACCGACGAGTGGGCGCAGACCCTATGA
PROTEIN sequence
Length: 187
MSDRKTALLVMDFQPGIVARLADEAVLDAATRAVDAARGAGVPVFFVRVAFRPGFPEAGERNAAFRAVAQAGDAMTQDHPATQVHDAFKPRPDEPVVVKRRVSAFSGSDLEVLLRAAEADSLVLAGISTSGVVLSTLRQAADLDYRLTVLADACGDLDPDVHRVLTEKVFPRQAVVTTTDEWAQTL*