ggKbase home page

SCN18_13_7_16_R2_B_scaffold_6070_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(1434..1880)

Top 3 Functional Annotations

Value Algorithm Source
AsnC family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B37450 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 148.0
  • Bit_score: 202
  • Evalue 2.50e-49
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 143.0
  • Bit_score: 174
  • Evalue 1.60e-41
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADB77117.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 143.0
  • Bit_score: 174
  • Evalue 7.80e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGGACTCCGTCGACCACCGGCTCATCGACGCGCTGCGCGCCAACGCCCGCGCGACGTACGCCGAGCTGGCCAAGCTGGTCGGCCTCAGCGCCCCGGCCGTGCACGACCGCGTCGGCAAGCTCGAGGCCGCCGGGGTCATCACCGGCTACCACGCCGCCGTCGCCCCCGACGCGCTCGGCCGCAGCATGAGCGCCCTCATCGGCGTGCTCATCACCGACGACGCCGACCTCGACCGCCTCACCGCCGAACTCACCGCGCTGGCCGTCGTCGAGGACTGCTGGTTCGTCGCCGGCGAGGAGACGTTCGTGCTCAAGGTCCGCGTGGCCGACGTCAGTGGCCTGGAGGGCGCGATCCGCACGCTGAACGCGATCCCGGGCATCGCCCGCACGCGCACCACTGTCGTCCTCTCGACCCGGTTCGAGGGCCGCGCCCCCCTCCTCGGCTAG
PROTEIN sequence
Length: 149
MDSVDHRLIDALRANARATYAELAKLVGLSAPAVHDRVGKLEAAGVITGYHAAVAPDALGRSMSALIGVLITDDADLDRLTAELTALAVVEDCWFVAGEETFVLKVRVADVSGLEGAIRTLNAIPGIARTRTTVVLSTRFEGRAPLLG*