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SCN18_13_7_16_R2_B_scaffold_5747_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 2..1477

Top 3 Functional Annotations

Value Algorithm Source
Mfs transporter n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2ZNM9_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 491.0
  • Bit_score: 593
  • Evalue 1.70e-166
Contig_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ19615.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 493.0
  • Bit_score: 594
  • Evalue 1.40e-166
EmrB/QacA subfamily drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 511.0
  • Bit_score: 592
  • Evalue 8.00e-167

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → SCNPILOT_SOLID2_TRIM150_Actinobacteria_70_13 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
GCGATCATGTCGATCCTCGACATCACCGTGGTCGGGGTCGCCCAGAACAAGTTCCAGTCGACCTGGAACACCACGCCGGCCACCGCCGCCTGGACGATGACGGCGTACACGCTCGCGCTGGCCGCGGTCATCCCGGTCAGCGGCTGGGCCGCCGACCGCTTCGGCACCAAGCGGCTCTACATGATGTCGATCAGCCTCTTCGTCGTCGGCTCGGCGCTCTGCGCGACGGCCTGGGGCATCGGCCCGCTCATCGTGTTCCGGGCCCTGCAGGGCCTCGGCGGCGGCATGCTGATGCCGATCGGCATGACGATCCTGACGCAGGCCGCCGGCCCCGAGCGGGTCGGCCGGGTGATGGCCGTCCTCGGCATCCCGATGCTGCTCGGCCCGATCGGCGGTCCGATCCTCGGTGGCTGGCTCATCGACGTCGCCAGCTGGCACTGGATCTTCCTCATCAACGTGCCGATCGGCGCGCTCGCGCTCGTGTACTCGCTCGTCGTCCTGCCCAAGGACGCCCCGACGCCGTCGGAGACCTTCGACACGACCGGCTTCGCGCTGCTCTCACCCGGCCTCGCCATCTTCCTCTTCGGCGTCTCGTCCATCCCGCAGGAGGGGACGATCGCCTCGGCCAAGGTGCTGATCTGCGCCGCGGTCGGACTCGTGCTGATCGTCGCCTTCGTCCTCCACGCGCTGCACCGCGCGCGGCACCCGCTCATCGACCTGCACCTGTTCGGCAACCGGGAGCTGACGGTCGCGGTCATCACCATGACGCTCTTCGCCATCGCCTTCTTCGGCGCGATGCTGCTCTTCCCGCAGTACTTCATCGGCGTCCGCGGCAAGACGCCGTCGATGGCCGGCATCCTCGGCGCGCCGATGGGCATCGGCGCGATGTTCACGATGCCCGCGGCCGGCGCGCTCACCGACAAGTTCGGGCCGGGGCGCTTCGTCCTCACCGGACTGGTGCTGATCGTCGTCGGGATGATCCCGTTCACCCAGCTCGGCGTCGACACGTCGTTCTGGCTCACCACCGGCGCGTTCTTCGTGATGGGCCTCGGCATGGGCATGACGATGATGCCGACGATGACCGCGGCGCTGCGGACGCTGCAGCACGCCCAGATCGCCCGGGGCTCCACGCTGATGAACATCACCCAGCAGATCGCCTCCTCGATCGGTACCGCGGTGATGTCGGTGCTGCTGACGACCTACCTCAAAGACAATCCGGCCGCGCCGATCGCCATCCTCGCCAACACCGACCCGGCGCACGGCGATCCGGCGCTGGCCGGCGCGGCGGGCAGCGCCGGCGTCACGCCCGCGGCGCTCAAGCTCTCCGGGCTGCACTCGGCCGCCGACTCGTTCGCCAAGACCGTGCTCGTCGCGCTGATCCTGGTGGCCTGCACGATCATCCCGGCGTACTTCCTGCCCCGGAACCGGGCGCCGCTGAGCGAGGATGCGCCCGCGACGCCGGTGCTCGCCCACTGA
PROTEIN sequence
Length: 492
AIMSILDITVVGVAQNKFQSTWNTTPATAAWTMTAYTLALAAVIPVSGWAADRFGTKRLYMMSISLFVVGSALCATAWGIGPLIVFRALQGLGGGMLMPIGMTILTQAAGPERVGRVMAVLGIPMLLGPIGGPILGGWLIDVASWHWIFLINVPIGALALVYSLVVLPKDAPTPSETFDTTGFALLSPGLAIFLFGVSSIPQEGTIASAKVLICAAVGLVLIVAFVLHALHRARHPLIDLHLFGNRELTVAVITMTLFAIAFFGAMLLFPQYFIGVRGKTPSMAGILGAPMGIGAMFTMPAAGALTDKFGPGRFVLTGLVLIVVGMIPFTQLGVDTSFWLTTGAFFVMGLGMGMTMMPTMTAALRTLQHAQIARGSTLMNITQQIASSIGTAVMSVLLTTYLKDNPAAPIAILANTDPAHGDPALAGAAGSAGVTPAALKLSGLHSAADSFAKTVLVALILVACTIIPAYFLPRNRAPLSEDAPATPVLAH*