ggKbase home page

SCN18_13_7_16_R2_B_scaffold_4750_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 980..1588

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00036C3137 similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 204.0
  • Bit_score: 224
  • Evalue 4.90e-56
Regulatory protein TetR {ECO:0000313|EMBL:EHB59014.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 185.0
  • Bit_score: 220
  • Evalue 1.30e-54
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 189.0
  • Bit_score: 213
  • Evalue 4.20e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGACCGAGTCCGCACGCCGCCGCGACCCGCAACGGCGTCAACGAATCCTCACCGCAGCCGCCGACCTGGTGGCCGAGCGCGGCTATCACGACGTCGCCATGGCAGACATCGGGGCCGCGGCCGGCATCACCGGCTCCGGCATCTACCGGCATTTCACCGGAAAGTCGGCCGTGCTGGCCGCGATGTTCGAACACGTCATCGACGACCTCTCGAGCGAGGCGGCCGAGATCGTCGCCGCAGACCTGGCCCCGCGCCAGGCTCTCACGCGGTTGGTCCGCACCCAGGTGCGTTTCGTGCTCAAGGACCGAACCCTCGCGCAGGTGTATCACAACGAGATCACCAATCTCCCGAGTGAGGACAGGCATCGGCTGCGGCGCAAGCAGCGCCTCTACGTCGAGGAATGGGTGCACACGCTCGCCATTCAGCGTCCCGACATCAGTGACAGCGCGCTCAGAGCGCTGGTGCACGCTGCCATCGGAGCTATCCAGTCCGTCCTCTTCTATCAAAGCGGCCTGACCGACGAGCAACTCGCGACGCTGACGGAATCCGCTGCCGAAGCGGTCCTGTTCGCACCCCATCAACCGGCTCCACACTTGAAGGGAATCTAG
PROTEIN sequence
Length: 203
MTESARRRDPQRRQRILTAAADLVAERGYHDVAMADIGAAAGITGSGIYRHFTGKSAVLAAMFEHVIDDLSSEAAEIVAADLAPRQALTRLVRTQVRFVLKDRTLAQVYHNEITNLPSEDRHRLRRKQRLYVEEWVHTLAIQRPDISDSALRALVHAAIGAIQSVLFYQSGLTDEQLATLTESAAEAVLFAPHQPAPHLKGI*