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SCN18_13_7_16_R2_B_scaffold_6235_3

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 1723..2469

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, TetR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B0H2_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 243.0
  • Bit_score: 183
  • Evalue 2.60e-43
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CCH74705.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 238.0
  • Bit_score: 219
  • Evalue 3.50e-54
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 243.0
  • Bit_score: 183
  • Evalue 7.40e-44

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGACCGCCGAACCCGCCCGCCGCCCGAGCCGGGCCGAGACCGCCCGGGCCCGTGCCGCCGGCAGCCGCCGACGTCCGGCTCTGGGCCGCGACGCGATCGTGGAAGTGGCGCTGCGCATCGTCGACGCGGAGGGGGTCGACGAGGTCTCCATGCGCCGCGTGGCCGCCGAGTTCGACACCGGCCCGGCCAGCCTCTACGCGTACTTCCCCAACAAGGAGGCGCTGCTCAACGCGGTGCTCGACCAGGTCATCGAGGAGATCGAGGTACCGGACGACGCCGACTGGCAGGAGCTGCTGCGCAAGTACGCGCAGACGGCCCGTGACGTCTTCGCCGCACACAACGACATCGCGCGGCTGAGCTTCGCGCACATCCCGAACAACCCGCAGATGATGGCCGGCGCCGAGCTGATGCTGGGCCGGATGATCGAGGGCGGCGTGCCGCCCCGGGTGGCCGCGTGGTCGATGGACATCCTCGCGCTCTACATCGCCGCCGCTGCCTACGAGGGCTACCTCCTGGGCCGCCGCTTCGACGACGGCAGCGGGCGCGACCCGCACGAGGCCGGCCTCGAGTACACGGCCGACGTCGCCGAGTCCTTCGCCGCGGCCCCGCCGGAGGAGTTCCCGTACCTCAACCGCTACGCGCAGGAGCTGATGACCGGCAGCAGCGACGACCGGTTCACCTTCGGCATCGACATGCTGATCGCCGGGTTCGCCTCGCGCGTACCGCCGCGCCGCCGGCGCCGCTGA
PROTEIN sequence
Length: 249
VTAEPARRPSRAETARARAAGSRRRPALGRDAIVEVALRIVDAEGVDEVSMRRVAAEFDTGPASLYAYFPNKEALLNAVLDQVIEEIEVPDDADWQELLRKYAQTARDVFAAHNDIARLSFAHIPNNPQMMAGAELMLGRMIEGGVPPRVAAWSMDILALYIAAAAYEGYLLGRRFDDGSGRDPHEAGLEYTADVAESFAAAPPEEFPYLNRYAQELMTGSSDDRFTFGIDMLIAGFASRVPPRRRRR*