ggKbase home page

SCN18_13_7_16_R2_B_scaffold_8460_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: 2..532

Top 3 Functional Annotations

Value Algorithm Source
ugpC; putative multiple sugar-binding transport ATP-binding protein (EC:3.6.3.20) similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 169.0
  • Bit_score: 185
  • Evalue 8.10e-45
ABC transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5537B similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 176.0
  • Bit_score: 229
  • Evalue 1.30e-57
ABC transporter {ECO:0000313|EMBL:EWT05424.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 176.0
  • Bit_score: 211
  • Evalue 8.90e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 531
AACTTCCTGCCGGCGACGGTGGGCGACGGCAAGTTGGACATGCCGTTCACCTCGCTGCCCATCCCGCCGGCGGTGGCCGCGGCCAAGAAGCCGGGGGACCTGGTGATCGTGGGCATCCGTCCCGAGGCCTTCGAGGACGCGGCCCTGGTCGAGGAGGCGCACCGCGCCGGCGGCACCACGTTCACGGCCAACGTCGATGTCACCGAGTGGCTGGGCAACGAGAAGTACGCCTACCTACCGTTCGAGCCGCATCCAGAGGTCCAGGCCGCGCTGAACGAGCTGGACCGGGAGCTGGACGGCGAGGCGATGCGCACGCAGCTCGTCGTCAGCCTGGACGGGTCGAGCAAGATCAAGCAGGGCGACGACGCCCACCTCTGGTTCAATCCGGCCTCGGTGCACGTCTTCGACGCCGCGTCCGGGGAGAACCTCACGCGGGACGAGGCCAAGGCGGCCGAGATCGCTCGGGAGTCCGAGGACGACCGCAAGCGCGAGCTGGAGCGGGCCAAGCGGCTCGAACCGGCGAGCGCCTGA
PROTEIN sequence
Length: 177
NFLPATVGDGKLDMPFTSLPIPPAVAAAKKPGDLVIVGIRPEAFEDAALVEEAHRAGGTTFTANVDVTEWLGNEKYAYLPFEPHPEVQAALNELDRELDGEAMRTQLVVSLDGSSKIKQGDDAHLWFNPASVHVFDAASGENLTRDEAKAAEIARESEDDRKRELERAKRLEPASA*