ggKbase home page

SCN18_13_7_16_R2_B_scaffold_15265_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(3..947)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B70028 similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 313.0
  • Bit_score: 480
  • Evalue 1.00e-132
Putative TIM-barrel protein, nifR3 family {ECO:0000313|EMBL:EXG80462.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 311.0
  • Bit_score: 462
  • Evalue 4.00e-127
nifR3 family TIM-barrel protein similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 323.0
  • Bit_score: 433
  • Evalue 4.00e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGACGACGGTCGCCGTGGCGCCGCTTCGGCTCTCCGAGAAGGTCGTCGCCGACCCGCCGGTCGTCCTCGCCCCGATGGCCGGCATCACCAACACCGCGTTCCGACGGCTGTGCCGTTCGTACGGCGGCGGTCTCTTCGTCTCGGAGATGATCACCACCCGAGCCCTGGTCGAGCGCAACCCGAAGACGATGCAGCTCATCCGCTTCGCCCCCGACGAGTCGCCCCGCTCGATCCAGCTCTACGGCGTCGACCCGGCCGTCGTCGGGGCGGCGGTGCGCATGATCGTCGACGAGGACCTCGCCGATCACGTCGACCTCAACTTCGGCTGCCCCGTCCCCAAGGTCACCCGCAAGGGCGGCGGCTCGGCCCTGCCCTGGCGCATCGGCCTCTTCGAGGACATCGTGACGGCGGCGGTGCGTGAGGCCCGCGGCGCCGTCCCGGTCACGGTGAAGATGCGGGTGGGCATCGACGCCGACCACGTCACCTACCTGGAGGCCGGCCTGCGGGCCCAAGATGCCGGGGTCGCGCACGTCGCGCTGCACGGCCGGACGGCCGAGCAGTTCTACGGCGGCCAGGCCGACTGGGCCACGATCGCCGCCCTGGTCGAGGCGCTGGACGTCCCGGTGCTCGGCAACGGCGACATCTGGGAGGGGGACGACGGGACGCGGATGGTGCGCGAGACCGGCTGCGCCGGCGTCGTCGTCGGCCGCGGCTGCCTCGGGCGGCCCTGGCTCTTCGCCGACCTGGAGGCCGCCTTCGCCGGACGGACCGAGCGGGTCCGCCCTACCCTGGGCGCGGTGGCGACGGCGATGCGGCGGCACGTCGAACTCCTCGCCGACTGGCTCGGCGAGCAGCGCGGGGTCGTCGACTTCCGCAAGCACGTGGCCTGGTACCTGAAGGGGTTCGCGGTCGGCGGCGAGACCAGGCGGGCGCTCGCGACCTCG
PROTEIN sequence
Length: 315
MTTVAVAPLRLSEKVVADPPVVLAPMAGITNTAFRRLCRSYGGGLFVSEMITTRALVERNPKTMQLIRFAPDESPRSIQLYGVDPAVVGAAVRMIVDEDLADHVDLNFGCPVPKVTRKGGGSALPWRIGLFEDIVTAAVREARGAVPVTVKMRVGIDADHVTYLEAGLRAQDAGVAHVALHGRTAEQFYGGQADWATIAALVEALDVPVLGNGDIWEGDDGTRMVRETGCAGVVVGRGCLGRPWLFADLEAAFAGRTERVRPTLGAVATAMRRHVELLADWLGEQRGVVDFRKHVAWYLKGFAVGGETRRALATS