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SCN18_13_7_16_R2_B_scaffold_17664_2

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(361..999)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal subunit interface protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B709EC similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 202.0
  • Bit_score: 287
  • Evalue 8.40e-75
sigma 54 modulation protein/ribosomal protein S30EA similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 208.0
  • Bit_score: 265
  • Evalue 7.40e-69
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ABV96825.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 208.0
  • Bit_score: 265
  • Evalue 3.70e-68

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Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGGAAACTGTCGTGGCGCGCATGGAGATCGTTGTCCGTGGCCGCAATGTCGTCATACCCGAGCACTATCGGCAACACGTGGCCGAGAAACTCGCCAAGCTCGAGCGATACGACGACAAGATCATCCGCGCTGACGTCGAACTCCAGCACGAGAAGAACCCACGACAGAACGGCAGCTGCCAGCACGTCGAGATCACCTGCCGCACGCGCGGCCCGGTGGTGCGCAGCGAGGCCTGTGCCGAGGACTTCTACAAGGCGCTGGACATCGCTGCCGATCGCCTCGAACGGCGGTTCCGGCAGGCGGCCGACCGCCGGCGGGTGCACCACGGACGGCGCACGCCCCGATCGGTGGCCGAGGTGACCGCCGACCTGTCGGGTGAGGACTCGGTCGACGCCGAGCTGGTCTCCGGCGGCGCCCCCGGTGCGACCGAGCCGGACGAGGCGCTGGAGGGCCCCGGGCGCATCGTGCGCGAGAAGGAGCACCCGGCCAAGCCGATGTCAGTCGACCAGGCCCTCTTCGAGATGGAGCTGGTGGGGCACGACTTCTACCTCTTCAGCGACGTCGACACCGGTCGGCCCAGTGTCGTGTACCGGCGCCACGCCTACGACTACGGACTGATCCGGCTCGGCACCGACTGA
PROTEIN sequence
Length: 213
METVVARMEIVVRGRNVVIPEHYRQHVAEKLAKLERYDDKIIRADVELQHEKNPRQNGSCQHVEITCRTRGPVVRSEACAEDFYKALDIAADRLERRFRQAADRRRVHHGRRTPRSVAEVTADLSGEDSVDAELVSGGAPGATEPDEALEGPGRIVREKEHPAKPMSVDQALFEMELVGHDFYLFSDVDTGRPSVVYRRHAYDYGLIRLGTD*