ggKbase home page

SCN18_13_7_16_R2_B_scaffold_25836_1

Organism: SCN18_13_7_16_R2_B_Actinobacteria_71_7

partial RP 26 / 55 BSCG 28 / 51 ASCG 7 / 38
Location: comp(3..389)

Top 3 Functional Annotations

Value Algorithm Source
rnhB; ribonuclease HII (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 119.0
  • Bit_score: 153
  • Evalue 3.30e-35
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 119.0
  • Bit_score: 153
  • Evalue 1.60e-34
ribonuclease HII n=1 Tax=Salinispora pacifica RepID=UPI00037CD911 similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 119.0
  • Bit_score: 155
  • Evalue 2.30e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGACCGCGTCGGTGAACAGTGCGGCGCCGACTCCGCGGCTGCCACGGATCCTCGTGCGGCGCGACGGCCCGCTGGGTGGCTACGAGTCCGCGCTCGGGCGTGCCGGGTTCGGCCTGGTCGCCGGGGCCGATGAGGCCGGTCGCGGCGCCTGCGCCGGTCCGCTCGTCGTCGCCGCGTGCATCCTGCCGTCCGGTCGCCGGGGCCGGATCGAGGGGCTGGACGACTCGAAGCTGCTGACCGCCAGGACGCGTGAGCGGCTCTACGAGCAGGTCGTCCGGCGGGCCGTCGCCTACTCGGTGATGATCATCCCGGCCGCCGAGATCGACGCCTATGGCCTGCACGTCGCGAACCTCGCGGGGATGCGCCGCGCCCTCGGCACCCTGGTC
PROTEIN sequence
Length: 129
MTASVNSAAPTPRLPRILVRRDGPLGGYESALGRAGFGLVAGADEAGRGACAGPLVVAACILPSGRRGRIEGLDDSKLLTARTRERLYEQVVRRAVAYSVMIIPAAEIDAYGLHVANLAGMRRALGTLV