ggKbase home page

SCN18_14_9_16_R4_B_scaffold_4222_3

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1322..2590)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI000365A914 similarity UNIREF
DB: UNIREF100
  • Identity: 42.0
  • Coverage: 400.0
  • Bit_score: 271
  • Evalue 7.30e-70
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 26.2
  • Coverage: 451.0
  • Bit_score: 122
  • Evalue 2.60e-25
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10 similarity UNIPROT
DB: UniProtKB
  • Identity: 40.4
  • Coverage: 456.0
  • Bit_score: 279
  • Evalue 6.40e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1269
ATGTCGACAGCTTCGAGCGAGACCGTGTCTCTGGGGTTCGGGTCGTACCTGCGAACGCTGCGACTGCACTGGCGGTCGGTCGCGGCCTGCGCGCTCATCGGAGTCATCGCCGCGCTCGGCTACCTGGTGTTCGCTCCGCAGGCGGTCACCGCCACCACCACCCTCAACCTCAACGCGATCACGAGCGAGCCGTTCAGCTCGCTGCGCCCGGCATCGGGCCTGATCGACGGCAAGACCGAGTCCGACATCGCCCGCTCCCACGTGGTCGCCACCGCCGCGAAGAAGCTGCTCGGAGAGGGCTATACGGCCTCCGACATCCGCGATGCCACGAACGTGAGCATCGCCGACGGCGCCACCGTGATCCGCATCATGTTCACCGCGGGCTCGTCCACGCTCGCCGTCGACGGCTCGAACGCGGTCAGCAAGGCCTATCTCGACTTCAGGCAGGCGCAGGCGGAGGATCGCATCACCACGATGGTCGGCGGACTCGACGAGCGCATCACCACGCTGAACGCCGAGCTCGTCAAGGCGAATCAGAAGATCGGCGCGGCAGTGCGCACCAGCGACGCCTACGCGCAGGCCATCTCGCAGCAGCAGCAGATCCTGGCGGAGCTGAGCGGGCTGCTCTCCTCGCGCAACGCGCTGCAGAGCATCGACACCGCGAGCGGCACCGTGCTGACGGCCGCAGAGGACTATCCGCTCGACATCAAACCGAGCAAGTCGCTGGTGCTGCTCACCGGCCTGATGGCCGGCCTGGTCATCGGTGTGGTGGTCGCGTTCGCCAGGGGTCCGCTGCAGCGACGCGTCCGCTCCGCGCGAGATGTCTCGTTCGCGCTCGACGCGCCGCTGCTCACCCGGCGCACCGACGGCGCACAGATCCCGGATCCGGCGGACTCGGCCGCACTGGCCTGGCAGTACGCGCTGAACACCGTACCGAAACCGACCGCGCTGCTCGTGGTCGACGCGACGAGCAGCGCGGACGGATCGGCCGAATTCGCCACGGCACTCGCCTCGGCGGGCTCGGCGAGGGTCACCCGGGTGGGTCTGGCCGAGGGTGAGGCCGCGCTGCTCTCGGCGTTGCGCGGCGCCCAGGCGGCGGTCGTCGTCTTCAGCCGAGGCGACGACCTGCGGCGGCTCCGCGAGCTCAGGCGGCTCGCGGAAACGCTCGAGATCCCGTTTCTGGGCTGTGCGGAGCGGCAGCGGCCGGATCGCTCGACGCGACAGCGGCAGACAACGGCTCCCGCAGCATCCCCCACTTCCTCCGCATAG
PROTEIN sequence
Length: 423
MSTASSETVSLGFGSYLRTLRLHWRSVAACALIGVIAALGYLVFAPQAVTATTTLNLNAITSEPFSSLRPASGLIDGKTESDIARSHVVATAAKKLLGEGYTASDIRDATNVSIADGATVIRIMFTAGSSTLAVDGSNAVSKAYLDFRQAQAEDRITTMVGGLDERITTLNAELVKANQKIGAAVRTSDAYAQAISQQQQILAELSGLLSSRNALQSIDTASGTVLTAAEDYPLDIKPSKSLVLLTGLMAGLVIGVVVAFARGPLQRRVRSARDVSFALDAPLLTRRTDGAQIPDPADSAALAWQYALNTVPKPTALLVVDATSSADGSAEFATALASAGSARVTRVGLAEGEAALLSALRGAQAAVVVFSRGDDLRRLRELRRLAETLEIPFLGCAERQRPDRSTRQRQTTAPAASPTSSA*