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SCN18_14_9_16_R4_B_scaffold_8663_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1000..1674)

Top 3 Functional Annotations

Value Algorithm Source
Two-component system response regulator n=1 Tax=Corynebacterium variabile (strain DSM 44702 / JCM 12073 / NCIMB 30131) RepID=G0HCQ8_CORVD similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 226.0
  • Bit_score: 295
  • Evalue 2.50e-77
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CDK00295.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 223.0
  • Bit_score: 312
  • Evalue 3.60e-82
two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 226.0
  • Bit_score: 295
  • Evalue 7.10e-78

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCCCACCGTGCTCGTGGCAGATGATCAAGCATTGATTCGGCAGGCGGTTTCGGACATTCTCGAGACCCATCCCGAGCTCACCGTGCTGGGGCAGGCGGTCGATGGTGCGGAGGCGGTCGCGATGGCCGCCGAGCTGCGGCCCGACGTGGTGCTGATGGACATCCGCATGCCCGGCATGGACGGCATCGAGGCGACCGGCGAGATCTGCCGGGACCCGCGGCTCGCGGAGACGCGGGTGCTGGTGCTCACCACCTTCGAGGAGGACGAGTACGTGGTCGCCGCATTGCGCGCCGGAGCGAGCGGATTCATCGGCAAGGGTGCCGAGCCCGAGGAGATCGCTCGTGCCGTGCTCGCGGTGCATGCGGGCGATGCGCTGCTCTCGCCGGCCGCGACCCGCGGACTGATCACGCGCTACGTGTTCGGCGACCGGGGGAGCTCGGGTACCGGCCTGCAGCAGGCGCCCGAGCTACGATTGCTCACCGAGCGCGAACGCGAAGTGCTGCTGCTGGTAGCCGGAGGGTGCTCGAACGACGAGATCGCCGAGCGGCTGTTCATCTCGCCGCACACAGCCAAGACGCACGTGAACCGGATCATGGCCAAGGTGCACGCGCACGATCGTGCGCAGCTGGTGATCCTCGCCTACGAGAGCGGGTTGCTCGTGCCGGGGCGGTGA
PROTEIN sequence
Length: 225
MPTVLVADDQALIRQAVSDILETHPELTVLGQAVDGAEAVAMAAELRPDVVLMDIRMPGMDGIEATGEICRDPRLAETRVLVLTTFEEDEYVVAALRAGASGFIGKGAEPEEIARAVLAVHAGDALLSPAATRGLITRYVFGDRGSSGTGLQQAPELRLLTEREREVLLLVAGGCSNDEIAERLFISPHTAKTHVNRIMAKVHAHDRAQLVILAYESGLLVPGR*