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SCN18_14_9_16_R4_B_scaffold_8696_1

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1..843)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Leucobacter salsicius RepID=UPI000344E784 similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 281.0
  • Bit_score: 505
  • Evalue 3.40e-140
30S ribosomal protein S1 {ECO:0000313|EMBL:EYT53818.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 281.0
  • Bit_score: 504
  • Evalue 8.20e-140
rpsA; 30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 281.0
  • Bit_score: 483
  • Evalue 3.90e-134

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGACGAACGCAACGACCGAAAAAGCAAGCAAGCAGGTCGCGATCAACGACATCGGCTCGGCCGAAGACTTCCTTGCCGCGGTCGAAGAGACCCTGAAGGGTAAAGACTTCAACGACGGCTCGCTCATCGAGGGCACCGTGGTGAAGATCGACCGCGACGAGGTGCTCCTCGACGTCGGTTACAAGACCGAGGGCGTCATCCCCTCGCGCGAGCTGTCCATCAAGCACGACATCAACCCTGACGAGGTCGTTCAGGTCGGCGATGCCGTCGAGGCGCTCGTGCTCCAGAAGGAGGACAAGGAAGGCCGTCTGATCCTGTCGAAGAAGCGCGCGCAGTACGAGCGTGCGTGGGGCGACGTGGAGAAGATCAAGGAGACCGAGGGTGTCGTCACCGGTACGGTCATCGAGGTCGTCAAGGGCGGTCTGATCGTCGACATCGGGCTGCGCGGCTTCCTTCCCGCATCGCTCATCGAGCTGCGCCGCGTGCGCGACCTGACCCCGTACCTGGGCCAGGAGATCGAGGCCAAGATCCTCGAGCTCGACAAGAACCGCAACAACGTGGTGCTCTCGCGCCGTGCGCTGCTCGAGGAGACCCAGTCGGCCAGCCGCTCGTCGTTCCTCGCCGAGCTCAAGCCCGGCCAGGTGCGCAAGGGTGTCATCTCGTCGATCGTCAACTTCGGCGCCTTCGTCGATCTCGGCGGCGTCGACGGCCTGGTGCACGTCTCGGAGCTCTCCTGGAAGCACATCGATCACGCGTCCGACGTGGTCGAGGTGGGCCAGGAGGTCACGGTCGAGGTGCTCTCGGTCGAGCTGGATCGCGAGCGAGTCTCGCTGTCGCTGAAG
PROTEIN sequence
Length: 281
MTNATTEKASKQVAINDIGSAEDFLAAVEETLKGKDFNDGSLIEGTVVKIDRDEVLLDVGYKTEGVIPSRELSIKHDINPDEVVQVGDAVEALVLQKEDKEGRLILSKKRAQYERAWGDVEKIKETEGVVTGTVIEVVKGGLIVDIGLRGFLPASLIELRRVRDLTPYLGQEIEAKILELDKNRNNVVLSRRALLEETQSASRSSFLAELKPGQVRKGVISSIVNFGAFVDLGGVDGLVHVSELSWKHIDHASDVVEVGQEVTVEVLSVELDRERVSLSLK