ggKbase home page

SCN18_14_9_16_R4_B_scaffold_6791_2

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(333..2441)

Top 3 Functional Annotations

Value Algorithm Source
(p)ppGpp synthetase n=1 Tax=Leucobacter salsicius RepID=UPI00036797D4 similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 701.0
  • Bit_score: 1185
  • Evalue 0.0
Leucobacter komagatae strain VKM ST2845 L_komagatae_05, whole genome shotgun sequence {ECO:0000313|EMBL:KIP53077.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 703.0
  • Bit_score: 1170
  • Evalue 0.0
relA; guanosine polyphosphate pyrophosphohydrolase/synthetase similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 705.0
  • Bit_score: 1039
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2109
GTGATCGAGCGCGCCTACCGCACAGCGGATCAGGCGCACAAGGATCAGAAGCGGCGCAGCGGCGAACCGTACATCACTCATCCGATCGCGGTCGCCCAGATCCTCGCAGAGCTGGGTGTCGCGCCGGTGGTGATCGCCGCCGCGCTGCTGCACGACACCGTGGAAGACACGGACTACTCGCTGGAGCAGCTCACCGCCGATTTCGGCGAGGAGATCGCGATGCTGGTCGACGGCGTGACCAAGCTCGACAAGGTCAAGTACGGCGACTCGGCCCAGGCCGAGACCGTGCGCAAGATGATCGTCTCGATGTCGCGCGACATCCGCGTGATCGTGATCAAGCTCGCGGATCGCCTGCACAATGCGCGCACGTGGGGCTTCGTTCCCGCCGACTCGGCGAAGCGGAAGGCTCAGGAGACACTCGAGATCTATACGCCGCTGGCGCACCGCCTCGGTATTCAGTCGATGAAGACGGAGCTCGAGGATCTCTCGTTCGCCGTGCTGAAGCCCAAGCTGTACGCCGAGATCGAGAACCTCGTGGCGCAGCGCAACCCGAAGCGCGAGGAACTCGTCGGCAAGGTCATCAACGCCTTGAGCGAAGACATGCGCGAGGCGCGCATCCGCGGCGAGGTGACCGGTCGGCCCAAGGAGCTCTACTCGATCTATCAGAAGATGATCGTGCGGGGCCGCGACTTCGACGACATCTACGATCTGGTGGGCATCCGCGTGCTCGTGAACTCGATCCGCGACTGCTACGCCGTGCTCGGCGCCGTTCACGCCCGCTGGACGCCGATCCCGGGTCGTTTCAAGGACTACATCGCCACCCCCAAGTTCAACCTCTACCAGTCGCTGCACACCACGGTGATCGGTCCGGACGGCCGCGCTGTCGAGATCCAGATCCGCACCTACGAGATGCATCAGCGCGCCGAGTACGGCGTCGCGGCGCACTGGAAGTACAAGCAGGGGCAGCAGGCCAACCCGACCTCGAACGACATGGCCTGGCTCGCCCATATCTCGGACTGGCAGGCGGAGACCGAGGATCCGAGCGAGTTCCTCGACGCGTTGCGTTTCGAGATCGGCGCGAAAGAGGTCTACGTCTTCACTCCGAAGGGCCGCGTGATCGGGTTGCCCTCGGGCGGTACACCGGTGGACTTCGCCTATGCCGTGCACACCGAGGTGGGGCACCGCACGATGGGCGCCCGCGTGAACGGCAAGCTGGTGCCACTCGAGACGGCGCTGCAGAACGGCGACGTGGTCGAGGTGGTCACCTCGAAGGATCCGAACGCCGGGCCCAACAAGGGGTGGCTGAGCTTCGTCAAGAGCAAGCGCGCGCAGAACAAGATCCGCCAGTGGTTCACCAAGGAGCGGCGTGAGGAGGCGACCGAACTCGGCAAGAACGAGCTGAGCAAAGCGCTGCGCAAGCAGGGGCTGCCGCTGCACCAGCTGATGAACTCCGAGGCGATCCAGCAGGTGGCGCTGCAGCTGCGCTACCCCGATGTCTCGGGCCTGCTGGCCGGCATCGGCGAGAGCCACGTGTCAGCGCAGTCGGTGATCGAGAAGGTCATGGCACTGGTGGATCGCGAAGCCTCGGGTGAGGAGTCCGCGCTCGCGGAGCTCCCGCTCTCGGCTCCGAGGCGCACGGGCAAGAGCGACTCCTCCTCGGGAGTGGTGGTCAAGGGTGCGAGCGACGTCGATGTACTGGTGAAGCTCGCCAAATGCTGCACCCCCGTGCCGGGCGACGAGATCCGCGGCTTCATCACCAAGGGCCAGGGCGTCTCGGTGCATCGCACCGACTGCCCCAACTTCATCGCGCTGCAATCGCAGGGCGACCGGCTGATCGACGTGGAGTGGGCACCGACCTCGAAGAGCGTGTTCCTGGTGCAGATCCAGGTGGAGGCGCTCGATCGCTCGGGCCTGCTCTCGGACGTGACCCGCACGCTCTCTGAGCACCACGTCAACATCCTCTCAGCATCGGTGCAGACCTCGAGCTCGCGGCTGGCCATCAGTCGTTTCCTCTTCGAGATGGCGAACACCACGCATCTCGATCACGTGCTGAACGCGGTGCGCCGCATCGAGGGCGTCTACGACGCCTATCGGGTGCACGGCGGGTAG
PROTEIN sequence
Length: 703
VIERAYRTADQAHKDQKRRSGEPYITHPIAVAQILAELGVAPVVIAAALLHDTVEDTDYSLEQLTADFGEEIAMLVDGVTKLDKVKYGDSAQAETVRKMIVSMSRDIRVIVIKLADRLHNARTWGFVPADSAKRKAQETLEIYTPLAHRLGIQSMKTELEDLSFAVLKPKLYAEIENLVAQRNPKREELVGKVINALSEDMREARIRGEVTGRPKELYSIYQKMIVRGRDFDDIYDLVGIRVLVNSIRDCYAVLGAVHARWTPIPGRFKDYIATPKFNLYQSLHTTVIGPDGRAVEIQIRTYEMHQRAEYGVAAHWKYKQGQQANPTSNDMAWLAHISDWQAETEDPSEFLDALRFEIGAKEVYVFTPKGRVIGLPSGGTPVDFAYAVHTEVGHRTMGARVNGKLVPLETALQNGDVVEVVTSKDPNAGPNKGWLSFVKSKRAQNKIRQWFTKERREEATELGKNELSKALRKQGLPLHQLMNSEAIQQVALQLRYPDVSGLLAGIGESHVSAQSVIEKVMALVDREASGEESALAELPLSAPRRTGKSDSSSGVVVKGASDVDVLVKLAKCCTPVPGDEIRGFITKGQGVSVHRTDCPNFIALQSQGDRLIDVEWAPTSKSVFLVQIQVEALDRSGLLSDVTRTLSEHHVNILSASVQTSSSRLAISRFLFEMANTTHLDHVLNAVRRIEGVYDAYRVHGG*