ggKbase home page

SCN18_14_9_16_R4_B_scaffold_15238_1

Organism: SCN18_14_9_16_R4_B_Actinobacteria_68_6

partial RP 33 / 55 MC: 3 BSCG 35 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(1..285)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI0003460455 similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 87.0
  • Bit_score: 62
  • Evalue 2.60e-07
ABC transporter permease protein similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 71.0
  • Bit_score: 63
  • Evalue 3.30e-08
ABC transporter permease protein {ECO:0000313|EMBL:AJC54325.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 71.0
  • Bit_score: 63
  • Evalue 1.60e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Solirubrobacterales_68_7 → SCNpilot_BF_INOC_Solirubrobacterales_68_7 → SCNpilot_BF_INOC_Solirubrobacterales_68_7 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGACCAAGCAGAACGAGGCGGCGATCCCGGGAGCGCCGACCGGAGGGCCGGCGGCCGCAGCCGGGGAGCGTCGTCGCCCGCGCGTGCTCGCCCGCTTCCTGGCCTCCAGGCAGGTGCGCTGGGGCATCGGGATCGTGGTGTTCATGACCCTGCTCGCCGTGTTCGGCGGGTTCTTCGCCCCGCACTCCGTCACCGAGCCGGTTTCGACTCCGTACGCCCCTCCGGGCAAGGGTCTGCTGCTCGGATCGGATCAGATCGGCCGCGATGTGTTCTCACGCGTGCTC
PROTEIN sequence
Length: 95
MTKQNEAAIPGAPTGGPAAAAGERRRPRVLARFLASRQVRWGIGIVVFMTLLAVFGGFFAPHSVTEPVSTPYAPPGKGLLLGSDQIGRDVFSRVL