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SCN18_25_8_15_R4_B_Microbacterium_70_7

In projects: SCN18_25_8_15_R4_B  |  scn18_genomes

Consensus taxonomy: Microbacterium  →  Actinomycetales  →  Actinobacteridae  →  Actinobacteria  →  Bacteria

Description

Extracted from SCN18_25_8_15_R4_B_concoct_019

Displaying items 51-100 of 864 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_25_8_15_R4_B_scaffold_24395
Species: CN-SCN_Microbacterium_18x (100%)
1 1216 bp 69.41 6.54 77.22
SCN18_25_8_15_R4_B_scaffold_24862
Genus: Microbacterium (66.67%)
3 1199 bp 72.64 6.13 77.31
SCN18_25_8_15_R4_B_scaffold_14040
Species: CN-SCN_Microbacterium_18x (100%)
1 1780 bp 74.61 5.48 77.53
SCN18_25_8_15_R4_B_scaffold_11961
Species: CN-SCN_Leifsonia_139x (50%)
4 1979 bp 67.46 6.37 77.77
SCN18_25_8_15_R4_B_scaffold_12641
Species: SCNPILOT_CONT_500_BF_Actinomycetales_73_43 (66.67%)
3 1907 bp 66.28 7.16 77.87
SCN18_25_8_15_R4_B_scaffold_29712
Genus: Microbacterium (100%)
3 1047 bp 71.44 6.59 77.94
SCN18_25_8_15_R4_B_scaffold_29877
Species: CN-SCN_Microbacterium_27x (100%)
3 1043 bp 71.43 5.90 77.95
SCN18_25_8_15_R4_B_scaffold_19392
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
2 1433 bp 67.06 7.64 78.30
SCN18_25_8_15_R4_B_scaffold_17809
Species: CN-SCN_Microbacterium_18x (66.67%)
3 1516 bp 70.32 5.64 78.76
SCN18_25_8_15_R4_B_scaffold_15070
Genus: Microbacterium (80%)
5 1695 bp 67.96 9.91 79.12
SCN18_25_8_15_R4_B_scaffold_7672
Genus: Microbacterium (66.67%)
3 2667 bp 68.58 7.48 79.19
SCN18_25_8_15_R4_B_scaffold_16628
Genus: Microbacterium (66.67%)
3 2498 bp 68.29 7.09 79.38
SCN18_25_8_15_R4_B_scaffold_9695
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (50%)
4 2271 bp 68.87 8.39 79.52
SCN18_25_8_15_R4_B_scaffold_14158
Species: CN-SCN_Leifsonia_139x (50%)
2 1769 bp 69.14 6.70 79.54
SCN18_25_8_15_R4_B_scaffold_18235
Genus: Microbacterium (75%)
4 1492 bp 69.03 8.85 79.62
SCN18_25_8_15_R4_B_scaffold_16244
Genus: Microbacterium (100%)
3 1614 bp 68.53 9.39 79.74
SCN18_25_8_15_R4_B_scaffold_5876
Species: CN-SCN_Microbacterium_18x (100%)
4 3208 bp 70.64 6.92 79.77
SCN18_25_8_15_R4_B_scaffold_12403
Species: SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 (50%)
2 1930 bp 69.59 6.76 79.90
SCN18_25_8_15_R4_B_scaffold_22945
Species: SCNpilot_P_inoc_Microbacterium_67_17 (100%)
1 1272 bp 71.86 6.49 79.95
SCN18_25_8_15_R4_B_scaffold_14174
Genus: Microbacterium (80%)
5 2908 bp 66.71 6.96 80.47
SCN18_25_8_15_R4_B_scaffold_7025
Species: CN-SCN_Microbacterium_18x (100%)
3 2829 bp 69.78 8.64 80.49
SCN18_25_8_15_R4_B_scaffold_11521
Species: CN-SCN_Microbacterium_18x (66.67%)
3 2027 bp 70.84 6.96 80.66
SCN18_25_8_15_R4_B_scaffold_19417
Species: CN-SCN_Microbacterium_27x (50%)
2 1432 bp 72.63 9.22 80.87
SCN18_25_8_15_R4_B_scaffold_10422
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (50%)
4 2166 bp 69.81 5.61 80.89
SCN18_25_8_15_R4_B_scaffold_22721
Species: SCNpilot_P_inoc_Microbacterium_67_17 (50%)
2 1282 bp 67.00 7.49 80.97
SCN18_25_8_15_R4_B_scaffold_16481
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (50%)
2 1599 bp 74.11 6.19 81.05
SCN18_25_8_15_R4_B_scaffold_20695
Species: CN-SCN_Microbacterium_37x (50%)
2 1369 bp 70.49 7.67 81.08
SCN18_25_8_15_R4_B_scaffold_19074
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
2 1450 bp 68.62 8.07 81.10
SCN18_25_8_15_R4_B_scaffold_40475
Species: CN-SCN_Microbacterium_18x (50%)
2 1372 bp 68.80 5.79 81.12
SCN18_25_8_15_R4_B_scaffold_24207
Species: CN-SCN_Microbacterium_18x (50%)
4 1223 bp 68.27 6.99 81.19
SCN18_25_8_15_R4_B_scaffold_39661
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (50%)
4 1606 bp 72.60 8.97 81.26
SCN18_25_8_15_R4_B_scaffold_25971
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (50%)
2 1161 bp 66.84 6.20 81.40
SCN18_25_8_15_R4_B_scaffold_11949
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (50%)
2 1980 bp 67.17 8.48 81.52
SCN18_25_8_15_R4_B_scaffold_20402
Species: CN-SCN_Microbacterium_37x (66.67%)
3 2060 bp 66.84 7.43 81.55
SCN18_25_8_15_R4_B_scaffold_31475
Species: CN-SCN_Microbacterium_200x (50%)
2 1001 bp 73.63 5.54 81.82
SCN18_25_8_15_R4_B_scaffold_24362
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (66.67%)
3 1217 bp 68.12 10.11 81.84
SCN18_25_8_15_R4_B_scaffold_15282
Genus: Microbacterium (66.67%)
3 1681 bp 68.71 5.44 82.09
SCN18_25_8_15_R4_B_scaffold_25605
Species: CN-SCN_Microbacterium_37x (50%)
2 1173 bp 69.82 8.82 82.10
SCN18_25_8_15_R4_B_scaffold_6843
Species: CN-SCN_Microbacterium_18x (75%)
8 2879 bp 67.00 6.77 82.18
SCN18_25_8_15_R4_B_scaffold_14082
Genus: Microbacterium (100%)
4 1777 bp 69.27 6.33 82.22
SCN18_25_8_15_R4_B_scaffold_25906
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1164 bp 68.99 7.47 82.47
SCN18_25_8_15_R4_B_scaffold_19096
Species: CN-SCN_Microbacterium_18x (50%)
2 1448 bp 73.00 6.63 82.67
SCN18_25_8_15_R4_B_scaffold_16339
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (66.67%)
3 1609 bp 69.30 7.55 82.78
SCN18_25_8_15_R4_B_scaffold_25157
Species: SCNPILOT_CONT_500_BF_Actinomycetales_73_43 (100%)
2 1188 bp 72.14 6.31 82.83
SCN18_25_8_15_R4_B_scaffold_18605
Species: SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 (50%)
2 1473 bp 66.19 7.33 82.89
SCN18_25_8_15_R4_B_scaffold_23543
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1248 bp 68.43 7.93 83.17
SCN18_25_8_15_R4_B_scaffold_11510
Genus: Microbacterium (100%)
3 2028 bp 71.10 7.32 83.28
SCN18_25_8_15_R4_B_scaffold_22937
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (50%)
2 1273 bp 71.09 6.83 83.43
SCN18_25_8_15_R4_B_scaffold_12366
Species: SCNpilot_BF_INOC_Solirubrobacterales_68_7 (66.67%)
3 1935 bp 71.42 6.82 83.57
SCN18_25_8_15_R4_B_scaffold_3250
Species: CN-SCN_Microbacterium_18x (100%)
7 5012 bp 69.87 8.05 83.68
Displaying items 51-100 of 864 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.