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SCN18_26_2_15_R2_B_Rhizobiales_61_8

In projects: SCN18_26_2_15_R2_B  |  scn18_genomes  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Rhizobiales  →  Alphaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Extracted from SCN18_26_2_15_R2_B_concoct_004

Displaying items 601-650 of 770 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_26_2_15_R2_B_scaffold_2627
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
8 10906 bp 62.37 8.10 93.28
SCN18_26_2_15_R2_B_scaffold_5100
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
6 6365 bp 61.49 8.11 79.04
SCN18_26_2_15_R2_B_scaffold_7050
Order: Rhizobiales (100%)
10 4880 bp 62.48 8.11 97.25
SCN18_26_2_15_R2_B_scaffold_3261
Order: Rhizobiales (63.64%)
11 9222 bp 61.72 8.12 85.91
SCN18_26_2_15_R2_B_scaffold_5671
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
5 5847 bp 62.63 8.13 91.64
SCN18_26_2_15_R2_B_scaffold_2788
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
9 10410 bp 62.52 8.14 92.94
SCN18_26_2_15_R2_B_scaffold_7214
Order: Rhizobiales (66.67%)
6 4787 bp 62.63 8.15 87.49
SCN18_26_2_15_R2_B_scaffold_7474
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
3 4657 bp 59.97 8.15 99.79
SCN18_26_2_15_R2_B_scaffold_3992
Order: Rhizobiales (83.33%)
6 7813 bp 61.64 8.16 86.43
SCN18_26_2_15_R2_B_scaffold_3274
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
8 9193 bp 62.20 8.16 94.54
SCN18_26_2_15_R2_B_scaffold_25527
Order: Rhizobiales (66.67%)
3 1655 bp 59.88 8.16 87.01
SCN18_26_2_15_R2_B_scaffold_2157
Order: Rhizobiales (72.73%)
11 12992 bp 62.61 8.16 87.54
SCN18_26_2_15_R2_B_scaffold_5470
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
6 6008 bp 61.58 8.16 95.22
SCN18_26_2_15_R2_B_scaffold_42289
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
2 1046 bp 58.22 8.17 95.51
SCN18_26_2_15_R2_B_scaffold_3175
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
9 9382 bp 61.30 8.17 88.48
SCN18_26_2_15_R2_B_scaffold_3973
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
8 7841 bp 59.11 8.17 88.42
SCN18_26_2_15_R2_B_scaffold_13353
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (66.67%)
3 2877 bp 66.70 8.19 88.74
SCN18_26_2_15_R2_B_scaffold_2482
Order: Rhizobiales (88.89%)
9 11524 bp 63.46 8.20 93.95
SCN18_26_2_15_R2_B_scaffold_13480
Order: Rhizobiales (80%)
5 2855 bp 60.28 8.20 84.48
SCN18_26_2_15_R2_B_scaffold_2971
Order: Rhizobiales (100%)
12 9918 bp 60.56 8.21 88.63
SCN18_26_2_15_R2_B_scaffold_18793
Species: Hyphomicrobium sp. MC1 (66.67%)
3 2156 bp 63.96 8.21 97.40
SCN18_26_2_15_R2_B_scaffold_18803
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (50%)
2 2156 bp 61.87 8.21 82.51
SCN18_26_2_15_R2_B_scaffold_4830
Order: Rhizobiales (66.67%)
6 6665 bp 60.44 8.21 88.45
SCN18_26_2_15_R2_B_scaffold_10939
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
2 3382 bp 61.47 8.21 89.95
SCN18_26_2_15_R2_B_scaffold_4504
Order: Rhizobiales (87.5%)
8 7023 bp 62.25 8.22 88.04
SCN18_26_2_15_R2_B_scaffold_11276
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
4 3303 bp 59.82 8.22 100.36
SCN18_26_2_15_R2_B_scaffold_4657
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
8 6861 bp 61.14 8.22 92.13
SCN18_26_2_15_R2_B_scaffold_7496
Order: Rhizobiales (83.33%)
6 4645 bp 62.00 8.23 82.09
SCN18_26_2_15_R2_B_scaffold_13380
Species: SCNPILOT_CONT_500_BF_Rhizobiales_64_17 (50%)
2 2872 bp 60.17 8.25 98.61
SCN18_26_2_15_R2_B_scaffold_34228
Order: Rhizobiales (75%)
4 1273 bp 59.86 8.25 89.32
SCN18_26_2_15_R2_B_scaffold_18992
Species: Hyphomicrobium sp. MC1 (50%)
6 3723 bp 62.69 8.26 85.58
SCN18_26_2_15_R2_B_scaffold_10812
Species: SCNPILOT_CONT_500_BF_Rhizobiales_63_22 (50%)
4 3414 bp 61.13 8.26 92.97
SCN18_26_2_15_R2_B_scaffold_13969
Species: CN-SCN_Mesorhizobium_20x (50%)
2 2775 bp 60.14 8.27 83.03
SCN18_26_2_15_R2_B_scaffold_6830
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
5 5019 bp 62.54 8.28 96.83
SCN18_26_2_15_R2_B_scaffold_16936
Order: Rhizobiales (66.67%)
3 2354 bp 58.41 8.28 80.93
SCN18_26_2_15_R2_B_scaffold_21996
Species: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial (50%)
2 1881 bp 61.51 8.29 82.62
SCN18_26_2_15_R2_B_scaffold_36137
Species: Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 (100%)
1 1212 bp 60.23 8.29 100.00
SCN18_26_2_15_R2_B_scaffold_31964
Species: SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 (50%)
2 1355 bp 67.75 8.30 99.63
SCN18_26_2_15_R2_B_scaffold_19981
Genus: Afipia (66.67%)
3 2043 bp 61.82 8.30 100.29
SCN18_26_2_15_R2_B_scaffold_4587
Order: Rhizobiales (83.33%)
6 6940 bp 62.06 8.30 91.73
SCN18_26_2_15_R2_B_scaffold_7851
Species: Hyphomicrobium sp. MC1 (55.56%)
9 4447 bp 61.16 8.30 81.90
SCN18_26_2_15_R2_B_scaffold_42937
Species: SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 (50%)
2 1030 bp 62.14 8.30 97.86
SCN18_26_2_15_R2_B_scaffold_4091
Order: Rhizobiales (76.92%)
13 9443 bp 60.42 8.31 80.35
SCN18_26_2_15_R2_B_scaffold_5019
Order: Rhizobiales (60%)
10 8856 bp 61.20 8.32 86.25
SCN18_26_2_15_R2_B_scaffold_2072
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
15 13408 bp 62.39 8.32 91.29
SCN18_26_2_15_R2_B_scaffold_24947
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
4 2503 bp 62.37 8.33 89.53
SCN18_26_2_15_R2_B_scaffold_5145
Species: SCNPILOT_CONT_300_BF_Rhizobiales_62_47 (100%)
6 6332 bp 61.29 8.34 89.83
SCN18_26_2_15_R2_B_scaffold_2858
Order: Rhizobiales (84.62%)
13 10974 bp 62.17 8.35 85.25
SCN18_26_2_15_R2_B_scaffold_2968
Order: Rhizobiales (72.73%)
11 9919 bp 61.42 8.36 89.07
SCN18_26_2_15_R2_B_scaffold_8701
Order: Rhizobiales (66.67%)
3 4081 bp 62.63 8.38 92.62
Displaying items 601-650 of 770 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.