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SCN18_30_10_14_R2_B_scaffold_4217_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2075..2965)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5N3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 287.0
  • Bit_score: 423
  • Evalue 1.10e-115
Transcriptional regulator {ECO:0000313|EMBL:EIL94774.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 287.0
  • Bit_score: 423
  • Evalue 1.50e-115
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 287.0
  • Bit_score: 398
  • Evalue 1.00e-108

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGATGCCTCCCTTGAACTACAACCACCTGCGCTATTTCTGGGCTGTCGCCCATGACGGCAACCTCACGCGTACGGCTACACGCCTGAACGTCACCCAATCCGCCCTGTCGGTCCAAATCCGCAAGCTGGAGGCGAGCCTCGGCAACGCGTTGTTCGAACGAAGCGGCCGCCAGCTACGCCTGACGGAAGCGGGGCGCATCGCGCTGGATCATGCCGATGCCATCTTCAATACGGGCGAGGAACTGCTGGGTACGCTTCGCGACGCCGGTATCATGCACAAGACCCTGCGCCTCGGCGCGTTGGCGACGCTGTCGCGCAATTTCCAGATGGAGTTCCTGCAACCTCTCCTTGGGCGGCCGGACGTCGAACTCGTCCTGCGTTCGGGCAACACAGCCGAGCTGATAGCTTCGCTTCGTTCGCTCAGTCTCGACGTCGTGTTGATCAATCAGCCGCCTGTGCATGACGGACATTCGCACCTCGTAGTCCACCGCCTCGCGGAGCGCGCGGTAAGCCTCATTGGATCCCCTGCGCGCTTTTGCACGAATTGCAGCCTGGCCGAGCGCCTGATGGCGCACCCTGTCATTGTCCCGACAAGCGGAACGAGTGTCCGCGCTGGGTTCGATGCACTGATCTACCAACTCGATATTCGTCCACACATCATCGCCGAAGCCGACGATATGGCGATGATGCGCTTGCTCGCGCGCGAAGACATCGGCATCGCCGTGCTGCCGCCCATCGTGGTGAAGGATGAGATCGCGGCCGGCACGCTTGTCGAAGGCGCTGCCCTTCCCGGTATCGTCCAGACATTCTATGCGGTGACGATGGAAAGGCGCTTTCCCAGTCCACTATTGAAAATACTGCTTGGCAAGCCGTCATTTGCAGGATCGTAG
PROTEIN sequence
Length: 297
MMPPLNYNHLRYFWAVAHDGNLTRTATRLNVTQSALSVQIRKLEASLGNALFERSGRQLRLTEAGRIALDHADAIFNTGEELLGTLRDAGIMHKTLRLGALATLSRNFQMEFLQPLLGRPDVELVLRSGNTAELIASLRSLSLDVVLINQPPVHDGHSHLVVHRLAERAVSLIGSPARFCTNCSLAERLMAHPVIVPTSGTSVRAGFDALIYQLDIRPHIIAEADDMAMMRLLAREDIGIAVLPPIVVKDEIAAGTLVEGAALPGIVQTFYAVTMERRFPSPLLKILLGKPSFAGS*