ggKbase home page

SCN18_30_10_14_R2_B_scaffold_4847_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(1560..2453)

Top 3 Functional Annotations

Value Algorithm Source
PaaX family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2P898_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 291.0
  • Bit_score: 375
  • Evalue 3.30e-101
PaaX family transcriptional regulator {ECO:0000313|EMBL:EKF43456.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 291.0
  • Bit_score: 375
  • Evalue 4.60e-101
paaX; phenylacetic acid degradation operon negative regulatory protein similarity KEGG
DB: KEGG
  • Identity: 46.7
  • Coverage: 276.0
  • Bit_score: 219
  • Evalue 1.10e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGACGCTCCATCCAGACCTGCCGAGGCAGCGCTAGACCGGCTGATCGCCCGGCTGCATGAACGCGGCCGCCCACGCGTCTGGTCGCTCGTCATCACCATATTCGGCGACGCCGTCGTTCCGCGTGGAGGGCGCGTGGCGCTTCAGGCGTTGCAGGACATCATGGGACGCCTGCGCATCGAGGCGGGCGCGCTTCGGACAGCGATGTCCAGGCTTGCCGCCGACCATTGGGTGACGCGCGAGCGTGATGGTCGCAACAGCTTCTATCGGCTGGCAGAGGAGGGGCGGCACGCCTTCGACCTTGCCACGCGGCGCATCTATGCCGCCGGGCCGCCGGACTGGGACGGCACCTGGACGGTAGCCGTCGTCCCACAGGCAAGCGACGGCGACCTGCGCGGCAGGATGGAAGAGGCGGGCTTCCTGTCGGTCGAGGGGAGTGTCTACCTTCGGCCCGGCACGGTTCCGGCCATCGCCGTGGACCCCGCCGGCATGCTGGTCATCCATGGCAGCAGCGCCGAGCATCCGGAAGCCATGCGCATGCTGTGGCCGAGCGAGGAGGTCGCAACGGCATACGGCGCGTTCATCGAGGCCTACCGTCCGCTGTCCGAAGCACTGAAACGGGGCGGAGCGTTTCGACCGCTCGATGCGATCTCTGCGCGCACGCTTCTTCTCCACGACTGGCGACGCATCGTCTTGCGCGATCCGGGCCTGCCGCTGGCGCTGCTGCCGAAGCATTGGCCCGGCGAGCAGGCGCGCTCGCTCGCTCGCGATATTTACGGCCGGCTGGCCGCGCCCAGCGAAGCATGGCTCACTGAAGCCGGCCTGCCGCCGCTCGCGAATCCGCGCGAGTTCGGTGGACGTTTCAGGATGAGCGGCAGTCACTCCTCCATATAG
PROTEIN sequence
Length: 298
MDAPSRPAEAALDRLIARLHERGRPRVWSLVITIFGDAVVPRGGRVALQALQDIMGRLRIEAGALRTAMSRLAADHWVTRERDGRNSFYRLAEEGRHAFDLATRRIYAAGPPDWDGTWTVAVVPQASDGDLRGRMEEAGFLSVEGSVYLRPGTVPAIAVDPAGMLVIHGSSAEHPEAMRMLWPSEEVATAYGAFIEAYRPLSEALKRGGAFRPLDAISARTLLLHDWRRIVLRDPGLPLALLPKHWPGEQARSLARDIYGRLAAPSEAWLTEAGLPPLANPREFGGRFRMSGSHSSI*