ggKbase home page

SCN18_30_10_14_R2_B_scaffold_4360_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2883..3491)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Fis family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B137_PARDP similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 202.0
  • Bit_score: 346
  • Evalue 1.10e-92
LuxR family transcriptional regulator {ECO:0000313|EMBL:KFL27259.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 202.0
  • Bit_score: 350
  • Evalue 1.10e-93
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 202.0
  • Bit_score: 346
  • Evalue 3.20e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGACCCACCCCGTTTATCTGGTCGATGACGACGAGGCCGTGCGCCGTGCGCTCGGCCTGCTTCTGTCCACGGTCGGCATCGAAGTCACGGGCTTCGCTGACCCGCAGGCATTTCTGTTCCATGTTCAGAAACTGGAGCCCGGCTGCCTGATCCTCGATATCCGCATGCCTGCCATTTCCGGGCTGAAGCTGCAGGAAAAGCTCAACGAACAGGGCATCGACTGGCCGACAATCGTCATTTCCGGCCATGGGGACATCGACGCCTGCCGCCGGGCCTTCCGCAATGGCGCGGTTGATTTCCTCTCCAAGCCGGTAGACGAGCAGGATCTGATCGATGCGATCCAAAAGGGGCAGGAGGTGCTGGAACGCACACTTGGCCGGCGCGCGGAGAAAGCCGAGGCGTTGGCGCTTCTGGATGCACTGACGCCGCGCGAACGCGAAGTGCTCGATCGCATCGCCGAAGGCTTCACCACGCGCCAGATTGCCGAGGGGCTGGGTTTGTCGCCACGCACGGTAGAAAGCCACCGCGCCGCCATCGGCGCCAAGCTCGGCACTACCTCGCAGGCCGAGATGACACGCCTGTGGCTGGAAGGTCGCGGGACTCCGTAG
PROTEIN sequence
Length: 203
MTHPVYLVDDDEAVRRALGLLLSTVGIEVTGFADPQAFLFHVQKLEPGCLILDIRMPAISGLKLQEKLNEQGIDWPTIVISGHGDIDACRRAFRNGAVDFLSKPVDEQDLIDAIQKGQEVLERTLGRRAEKAEALALLDALTPREREVLDRIAEGFTTRQIAEGLGLSPRTVESHRAAIGAKLGTTSQAEMTRLWLEGRGTP*