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SCN18_30_10_14_R2_B_scaffold_6506_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(754..1638)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00035E9820 similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 295.0
  • Bit_score: 492
  • Evalue 1.80e-136
AraC type helix-turn-helix-domain containing protein similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 294.0
  • Bit_score: 491
  • Evalue 1.50e-136
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ADV12039.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 294.0
  • Bit_score: 491
  • Evalue 7.50e-136

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGAAACCGGACCTGGAGGTCGTCCAGATACGGCGCGGCGAATCCTTCAAGGCTTGGTCGCACGGCTATCCGTTCCACACGGTCCGCTGGCATTTCCATCCCGAATACGAGATCCATCAGGTCGCCGCCACCAACGGCCGCTATTTCGTCGGCGACTTCATCGGCGAGTTCGAGCCCGGCAATCTCGTTCTCACCGGTCCCAACCTGCCGCATAATTGGGTGAGCGACCTGCCGGATGGCGTCACCATTCCGTTGCGTGGCCGCATCATCCAGTTCAGCGAAGAATTCGTCGGCGGGGCCATCAGGGCGCTGCCGGAATTGTCCGGCATCGGTCCGCTGCTCGAATCCTCCCGGCGGGGCATGCTGTTCGCCAATCGCACGAGCAGGGAACTCGCGCCCCTTATGGAAGAGATGATGGAGGCGAAGGGGGTGCGCCGCATCGAGCTTTTCATGGCAATCATGGGGATATTGAGCCGCGATCGTGATGCGCGGCCGCTCTCCAGCCCAAGCTACCTGCCCGATCCCTCGGGCTACATGTCAGCGGGCATGAACAAGGCGCTGGCCTTCATCCGTGAGAATCTGACCCGCCCCTTCGGCGAGTCCGAACTGGCGGCGATCGCCGGTCAGTCGCAGAGCGCCTTCTCGCGCTCCTTCCGCCGCCATACGGGCATGTCGCTGGTGCAGTACGTCAAGCGGCTGCGCATCAACCTCGCCTGCCAGATCCTGATGAGCGACAGCCGAGCGACCGTCACCGACATCTGCTTCGAGGTCGGCTTCAACAATCTGTCCAATTTCAACCGCCAGTTCCTGGCCGAGAAGGGCATGTCGCCTTCGCGTTTCAGGCGCCTTCTGGCGGGCAACATCAACGCGGCGCGCGCCGCCTGA
PROTEIN sequence
Length: 295
MKPDLEVVQIRRGESFKAWSHGYPFHTVRWHFHPEYEIHQVAATNGRYFVGDFIGEFEPGNLVLTGPNLPHNWVSDLPDGVTIPLRGRIIQFSEEFVGGAIRALPELSGIGPLLESSRRGMLFANRTSRELAPLMEEMMEAKGVRRIELFMAIMGILSRDRDARPLSSPSYLPDPSGYMSAGMNKALAFIRENLTRPFGESELAAIAGQSQSAFSRSFRRHTGMSLVQYVKRLRINLACQILMSDSRATVTDICFEVGFNNLSNFNRQFLAEKGMSPSRFRRLLAGNINAARAA*