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SCN18_30_10_14_R2_B_scaffold_5060_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(3152..4285)

Top 3 Functional Annotations

Value Algorithm Source
Putative Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component n=11 Tax=Vibrio nigripulchritudo RepID=U4JZ46_9VIBR similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 377.0
  • Bit_score: 479
  • Evalue 1.60e-132
ATPase {ECO:0000313|EMBL:KJV10247.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 377.0
  • Bit_score: 486
  • Evalue 2.40e-134
putative Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 64.7
  • Coverage: 377.0
  • Bit_score: 479
  • Evalue 4.50e-133

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
ATGGCCGGACAAACCGATCCCGGTGCGGCCGCCACGCCGATCGTGGATGTGGTCGACGAACGGCTCAGCCGCCAGTCCTGGTACCAGCGGCTGATGAGACGATCGGATTCCGGCGCTCTCGCCGGTGCGGTCCTGGTCCTCGTCTTCTTCGCCTTTACGGCGGGCGACACCGGTATGTTCGCTTCCGACGGCATCCTGAGTTGGATGACCGTCACGGCGCAACTCATGATCATCGGGGTGGGCGCGGCGCTTCTGATGGTCGGCGGCGAGTTCGACCTTTCGGTGGGCTCGATGATCGGTTTCACCGGCATGATGATTGCCATCCCGACGATCTATTTCCATGTGCCGGTGGGGCTTAGCGTCATCCTCGCCTTCGTCGTGGCGATGGCGATCGGTGCGCTCAACGGTTACATCATCGTGCGCACGCGCCTGCCTTCCTTCATCGTCACGCTCGCCTCGCTCTATATCCTTCGCGGGCTGACGATCGCGCTTTCGATCATCTTCACCAACCGCACCATCGTCAGCGGGCTGAAGGAATATTCGGACAACAGCTTCGTGGCCTCGCTGTTTTCGGCCAAGCTGTTCCCCGGTTTCTTCCAGTGGCTGGCGGATAACGGCATCATCAACAAGCTGCCAAACGGCGCGCCAGCGGTTCCCGGCATTCCCATGCTGATCGTGTGGGCCTTCGTCATCGCCGTGATCGGCCATATCGTCCTGACCAGGACGCGGATCGGCAACTGGATATTCGCGTCCGGCGGCGACGCAGACGCGGCGCGTAATGTCGGCGTGCCGGTCAGCGCCGTGAAGATATCGCTGTTCATGGTGACGGCCTTTTGCGCCACCGTCTTTGCCGCCTGCCAGGTATTCGAGTTCGGCTCGGCCGCTGCCGACCGTGGCCTCTTGAAGGAGTTCGAGGCCATCATCGCCGCCGTCATCGGCGGCTGTCTGCTTACCGGCGGCTACGGTTCGGTGATCGGCGCCTGCCTCGGTGCGCTGATCTTCGGCGTCGTGCAGCAGGGCATCCTGTTCACCGGCGCGCCGAGCGACTGGTTCCAGGTGTTCCTGGGCGCGATGCTTCTGATCGCGGTCCTGTTCAACAGCTCGATCCGCCGGCGCGTGACGGGAGAACGCTGA
PROTEIN sequence
Length: 378
MAGQTDPGAAATPIVDVVDERLSRQSWYQRLMRRSDSGALAGAVLVLVFFAFTAGDTGMFASDGILSWMTVTAQLMIIGVGAALLMVGGEFDLSVGSMIGFTGMMIAIPTIYFHVPVGLSVILAFVVAMAIGALNGYIIVRTRLPSFIVTLASLYILRGLTIALSIIFTNRTIVSGLKEYSDNSFVASLFSAKLFPGFFQWLADNGIINKLPNGAPAVPGIPMLIVWAFVIAVIGHIVLTRTRIGNWIFASGGDADAARNVGVPVSAVKISLFMVTAFCATVFAACQVFEFGSAAADRGLLKEFEAIIAAVIGGCLLTGGYGSVIGACLGALIFGVVQQGILFTGAPSDWFQVFLGAMLLIAVLFNSSIRRRVTGER*