ggKbase home page

SCN18_30_10_14_R2_B_scaffold_9093_5

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 3302..3718

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFAE19 related cluster n=1 Tax=unknown RepID=UPI0003CFAE19 similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 138.0
  • Bit_score: 258
  • Evalue 2.70e-66
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 138.0
  • Bit_score: 258
  • Evalue 3.80e-66
TraR/DksA family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 138.0
  • Bit_score: 257
  • Evalue 1.70e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGAACGAACTCGTTGACGCCAAATACATACCCTCCGAAGACGAGCCGTTCATGAACGAACGGCAGAAATCCTACTTCCGGGCCAAGCTCGTTCTCTGGAAAAGCGACATTCTCCGTGAAGCCCGCGAAACGCTAGAAATCCTGCAGCAGGAAAACGCCAACCACCCCGACCTCGCCGACCGCGCCTCCTCCGAAACCGATCGGGCCATCGAGCTTCGTGCCCGCGACCGGCAGCGGAAGCTGATCGCGAAGATCGACGCGGCGCTGCAGCGGATCGAGGACGGTACTTATGGCTATTGCGAGGAGACGGGCGAGCCGATCTCGCTCAAGCGCCTCGACGCAAGGCCGATCGCCACGCTGTCCATCGAGGCGCAGGAACGTCACGAGCGGCGCGAGAAAATCTACCGCGACGATTAA
PROTEIN sequence
Length: 139
MNELVDAKYIPSEDEPFMNERQKSYFRAKLVLWKSDILREARETLEILQQENANHPDLADRASSETDRAIELRARDRQRKLIAKIDAALQRIEDGTYGYCEETGEPISLKRLDARPIATLSIEAQERHERREKIYRDD*