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SCN18_30_10_14_R2_B_scaffold_8177_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 2799..3050

Top 3 Functional Annotations

Value Algorithm Source
Holliday junction resolvase n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D144_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 83.0
  • Bit_score: 107
  • Evalue 4.70e-21
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:EDQ34379.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 83.0
  • Bit_score: 107
  • Evalue 6.60e-21
AbrB family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 83.0
  • Bit_score: 88
  • Evalue 8.30e-16

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGCGTGTTTCCGAAAAAGGGCAGATCACCATCCCAAAGAATCTGCGTGAGCTTGCCGGCATCAAGCCGAACGGCAACGTGTCTATTCATCTTGAGGGAGGGCGACTCGTGATCGAAACCGCGGACCGCTCCATCACCGAAGCCAACAAGGCGCGCCTGGAGCGATTCATGGAAGCGCTCAGGAAGCTGGAGGGAACGGGCGATCCTTCGATAAGCGCTGATGACGTGATGCGTGCGACCCGGGATCGCTGA
PROTEIN sequence
Length: 84
MRVSEKGQITIPKNLRELAGIKPNGNVSIHLEGGRLVIETADRSITEANKARLERFMEALRKLEGTGDPSISADDVMRATRDR*