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SCN18_30_10_14_R2_B_scaffold_7656_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1640..2203

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Q7CVD3_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 184.0
  • Bit_score: 249
  • Evalue 1.70e-63
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.2
  • Coverage: 184.0
  • Bit_score: 249
  • Evalue 4.90e-64
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:KJX85706.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 184.0
  • Bit_score: 249
  • Evalue 2.40e-63

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGGCGCTGCTCGGCCAGCGGCAACTCGAGCATCTGAAGGCGAATGATCTCCGACAGCCCATCCTCAACGATCTTGCCGGGCAAACGCGCGAGCTGGTGCGACTGACAGCGGCACGCAACCACGAACTGGTCTGGATAGGCTCGGCACGAGGACGGCGTTCAGGCCTGGTCTACGAAGCGGACATGAGCGAGAGGATCGTGCCGTTCGCAACGGCAAACGGCAAGGCCTGGCTCGCCAGCCTGCCGCGCGAGGAGGCGCTGCGTATCGCGCTTGAGGCAGGGCTCGGCCGCCTGGGCGTCGGCGCCGCGCGCGCGATCACGACCATTGAAGCCCTCGGGCGGGAACTTGACCTCACCGCGAAACGCGGATTCGGCCTTGCCCGCGCAGAAGCGGAGGATGGCGTCGGCGCGATCGCCGTTGCAATCCGCGTACGGAACGATGTCGTGGGAACGATGAGCGTTGCGGCCCCCCTCACGCGGCTCCCCGAAGAGCGTCTCGAGGAGCTTCTGCCGCTGCTCCGTCGCGCCGCGGACAATATGGCGATCGCCTGGGAGAGTGCTTAG
PROTEIN sequence
Length: 188
MALLGQRQLEHLKANDLRQPILNDLAGQTRELVRLTAARNHELVWIGSARGRRSGLVYEADMSERIVPFATANGKAWLASLPREEALRIALEAGLGRLGVGAARAITTIEALGRELDLTAKRGFGLARAEAEDGVGAIAVAIRVRNDVVGTMSVAAPLTRLPEERLEELLPLLRRAADNMAIAWESA*