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SCN18_30_10_14_R2_B_scaffold_9037_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(1396..2469)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035F4901 similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 358.0
  • Bit_score: 496
  • Evalue 2.00e-137
Type VI secretion protein {ECO:0000313|EMBL:ESY73589.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 362.0
  • Bit_score: 481
  • Evalue 9.40e-133
type VI secretion protein, vc_a0111 family similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 362.0
  • Bit_score: 474
  • Evalue 1.40e-131

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1074
ATGGCCGATGACGCCGGGCAATCGCTACCTCATCTAGAAGCCTCAGGGCCGCTTTCGGAAGCCTTCGATTTCTTCGAGCTGCTGCGTCGCCTGGAGCGCGACGGCCGGCTGTTCGGCCATTCGGGACGGCTGGCGCGCGAGCCGGCACGGCTCGATCAGCATGTCCGCCTCGGTTTTTCTCCTCGCGACGTAATGCATTTCACGGCCGAGGGAGAAAGCACTCCCGCCCGCATCGCGGTCGCGAATTTCGGGCTGCTCGGGCCGGAAGGGCCCATGCCGCTCCACGTGACGCGCTGGGTCATGGACCGGCTTTCACAAAGATGGTTCGCCGGCCAGGAAGCGAAGGAGACAAGTGACACCACGTTCGTCGACTTCGTCAACATCCTTCAGCATCGGCTGACCGCGCTCTTCTACCGGGCCTGGGCGGACGCCACGCCTGCTGTTCAGGTAGAACGCGCCGATGGCGATCGATTGCTGGCGATGCTGCGGTCGATGGCGGGCATCGGGCTGCCCGGAACCCGTGAAAAGGATAGCGCAGAAGACAGCGCCGGACTCGACCGCGTCAAGATCCCCCAGTCCGCCTCGCTTGCCATACAGCGCGATGGACCCGAAAAGCTCACGCAGTTTCTTGCCGAGGCGTTCGGCGTGCCGGTGCGCCTCAGGGAGTTTGTCGCAGCGTGGCTTACGGTGCCGGTTTCCCTGCAGACACGCCTTAGCGCCGCCTATGCGAGCCTCGGGAGCGCCGCAACGATCGGACCGCGCACCTTCAGCCGCCAGAGCCGCGTCGAAATCCTTGTCGGCCCGCTCGACCTCAAGACCTATATGTCGTTCCTTCCCGGCGGCGGCCGGCTCCGCCTTTTCGCGCGCGCCGTCCGCGACCTGATCGGCGAAGGCCTCGACGTCGATCTTCGTCTCGTGCTTGCCCGGCCGGAGGTGCCGCAGGCGCGCCTGGGGAAATCGCAGCTTGGGCGAACCGCCTGGCTGGCCCCGGCCAATGAGGACCCGGACGCGGATGATCTACGCCTGCGCACCATCGTCGGCTGGCGCCCCGAGGCAGCGGGAGCGGCGGCATGA
PROTEIN sequence
Length: 358
MADDAGQSLPHLEASGPLSEAFDFFELLRRLERDGRLFGHSGRLAREPARLDQHVRLGFSPRDVMHFTAEGESTPARIAVANFGLLGPEGPMPLHVTRWVMDRLSQRWFAGQEAKETSDTTFVDFVNILQHRLTALFYRAWADATPAVQVERADGDRLLAMLRSMAGIGLPGTREKDSAEDSAGLDRVKIPQSASLAIQRDGPEKLTQFLAEAFGVPVRLREFVAAWLTVPVSLQTRLSAAYASLGSAATIGPRTFSRQSRVEILVGPLDLKTYMSFLPGGGRLRLFARAVRDLIGEGLDVDLRLVLARPEVPQARLGKSQLGRTAWLAPANEDPDADDLRLRTIVGWRPEAAGAAA*