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SCN18_30_10_14_R2_B_scaffold_9681_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1561..2448

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Rhizobium gallicum RepID=UPI00035CDA66 similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 294.0
  • Bit_score: 340
  • Evalue 8.90e-91
RNA polymerase sigma 70 similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 294.0
  • Bit_score: 339
  • Evalue 9.60e-91
RNA polymerase sigma 70 {ECO:0000313|EMBL:AHF87556.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 294.0
  • Bit_score: 339
  • Evalue 4.80e-90

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
GTGATCGCGAAAAATCTTCTGGCGGATGAATTCGAGGCCAATCGCGCGCGCCTTGAATCGGTTGCCTACCGCATGCTCGGATCGCGCAGCGAAGCCGAGGATGCGGTACAGGAGGTGTGGCTGAGGCTCAGCCGAACCGACGCGCAATCGATCGGCAACATCGGCGGCTGGCTGACCACCGTGGTCGCGCGGCTTTGCCTCGACATGCTGCGCGCCCGTAAGTCGCGTCGGGAAGATTCGCTTGAACACATGGCCGGAGAGGAGATCCCGGTAGAGCCTTCCGTGGCTGCCACCGATGCTACGCCCGAAGAACAGATCGCGATGGCGGATTCCGTCGGGCTCGCCATGCTAGCGGTGCTGGAGACGCTCGGCCCTGCGGAGCGCGTCGCTTTTGTGCTCCACGACATGTTCGCCGTGCCGTTCGAGGAGATCGCGCCCGTGATCGGCCGCTCGCATGATGCAACCCGCCAACTTGCCAGCCGTGCCCGCCGGCGCGTGCAAGGCGTCAGGCCGGACGGCGCGATCGACAATGCGCGTCGACGCGAAATCGTCGATGCTTTTATCGCGGCCTCGCGCGTTGGTGATTTCTCGGCGCTACTCTCGCTGCTCGCCCCCGATGTGGTGTTTACCCCGGATGAGACGGCTACGCGGCTTGGCCAGCAAGGGGAGGCCCGGGGTGCCACGACAGTCGCGGCCTTGTTCAACGGCCGTGCACAGGCGGCGCGACCTGCCTTTATCGACGGGGTAGTCGATGTCGCCGTTATTCCCGGCGAGCGCCTGCTGTTGGTTCTCAGGCTGAGCATCGTCGACGGCCGGATCACCGGCATCGATGCCGTGGCGGACGCGGACCGGCTTGCGGAGCTCGACCTCGAGATTCTGGAGGGGTGA
PROTEIN sequence
Length: 296
VIAKNLLADEFEANRARLESVAYRMLGSRSEAEDAVQEVWLRLSRTDAQSIGNIGGWLTTVVARLCLDMLRARKSRREDSLEHMAGEEIPVEPSVAATDATPEEQIAMADSVGLAMLAVLETLGPAERVAFVLHDMFAVPFEEIAPVIGRSHDATRQLASRARRRVQGVRPDGAIDNARRREIVDAFIAASRVGDFSALLSLLAPDVVFTPDETATRLGQQGEARGATTVAALFNGRAQAARPAFIDGVVDVAVIPGERLLLVLRLSIVDGRITGIDAVADADRLAELDLEILEG*