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SCN18_30_10_14_R2_B_scaffold_11035_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(213..674)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF29E8 related cluster n=1 Tax=unknown RepID=UPI0003CF29E8 similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 153.0
  • Bit_score: 199
  • Evalue 2.20e-48
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:CDX34037.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.8
  • Coverage: 146.0
  • Bit_score: 199
  • Evalue 2.30e-48
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 146.0
  • Bit_score: 196
  • Evalue 4.00e-48

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
GTGACCGTACCCGGCGGAAAGCTGAAGCTGGTCGAGGCGGAGACCGGTGCCGACGAACGCTACCGCCTGCACGAACAGGTCGGCTTCATCCTGCGCAAGGTGAACCAGCGCCATATCGCCATCTTCGCGAGGCACATCGGCGACCTCACCCCGCCTCAATTCGCCGCGCTCGCCATGCTGGCGGAGATCGGCGAGGCCTCGCAGAACCAGCTTGGCGCGATGGTCGCGATGGATGCGGCGACGATCAAGGGCGTCATCGACCGGCTCAAGGCGCGGGGGCTGGTGACGCTGTCGGCGCATAGCGAGGATCGGCGCCGGCTGGTCGTCGGCCTTTCAGGCGAGGGGAAGGCCATGATCGGAAAGCTCCTGCCACTCGCCGAACGGATCACAGAAGAGACGCTCGCGCCGCTCAATGCCCGCGAGACGGTGACTTTCCTGAAACTGCTGGCCAGGCTGACATAG
PROTEIN sequence
Length: 154
VTVPGGKLKLVEAETGADERYRLHEQVGFILRKVNQRHIAIFARHIGDLTPPQFAALAMLAEIGEASQNQLGAMVAMDAATIKGVIDRLKARGLVTLSAHSEDRRRLVVGLSGEGKAMIGKLLPLAERITEETLAPLNARETVTFLKLLARLT*