ggKbase home page

SCN18_30_10_14_R2_B_scaffold_16417_6

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(2690..2923)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FFW1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 54.0
  • Bit_score: 94
  • Evalue 2.90e-17
UPF0391 membrane protein X772_23930 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 54.0
  • Bit_score: 94
  • Evalue 4.10e-17
Protein of unknown function (DUF1328) similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 54.0
  • Bit_score: 92
  • Evalue 3.10e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGTGGGCGGCGTTCTATCCGGGACAGTCTCCAATCTATCCGGGACACTTTTCAAAAGGAGGGATCATGCTTTACTGGGCTTTGGTATTTCTGGTCGTTGCGATCATCGCGGGCGCGTTGGGTTTCGGGGGCATCGCGGGCACCGCAGCCGGGATCGCGAAGATCATCTTCTTCATCTTCCTTGTCTTTCTGCTCCTCTCGCTCATCGCGGGGTTCCTCCGGCGCGCAAGGTAA
PROTEIN sequence
Length: 78
MWAAFYPGQSPIYPGHFSKGGIMLYWALVFLVVAIIAGALGFGGIAGTAAGIAKIIFFIFLVFLLLSLIAGFLRRAR*