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SCN18_30_10_14_R2_B_scaffold_16417_8

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(4313..4870)

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C5686 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 185.0
  • Bit_score: 301
  • Evalue 3.80e-79
Lytic transglycosylase {ECO:0000313|EMBL:EXL09562.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 185.0
  • Bit_score: 300
  • Evalue 1.50e-78
lytic murein transglycosylase similarity KEGG
DB: KEGG
  • Identity: 73.5
  • Coverage: 185.0
  • Bit_score: 288
  • Evalue 9.40e-76

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
TCGGTGCCGGACGCGCTGGCGACGGCGGCCAACTTGCTCCACCGTAGCGGCTGGCAGGTCGGCAGGACATGGGGTTACGAAGTGGTCCTGCCGGAGGGCCGCAAATTCCCCGCGGGCTCGCTCAGCATCGACAAATGGGCCTCGATCGGTGTCAAGCGGGCGAACGGCAAGGCCTTTCCGAACGGTTCCGAGAGCGCCGTGCTCAAGGTGCCGGACGGTCGCGTAGGACCGGCCTTCCTGATGCTCAAGAACTTCTATGTCATCAAGCGTTACAACAACGCCGACAAATATGCGCTCGCCGTCGGCCTTCTCGCCGACGAAATCGCCGGCTATGGCGGACTCGTGCATGATTGGAACCGGCCATTCGTCAAGCTGACATTCGAGGAGCGCGAGGAATTGCAGAAAAGACTGCAATCCTACGGCTATTACGACGGGAAGATCGACGGCCGCATCGGTTCGGGTTCGCGCGATGCGATCAAGGCCTATCAGGCACGAGCCGGCTTGACGCAGGACGGCCATCCGAGCAAGGAAGTGCTGACCAGCTTGCGGGGTCGGTAG
PROTEIN sequence
Length: 186
SVPDALATAANLLHRSGWQVGRTWGYEVVLPEGRKFPAGSLSIDKWASIGVKRANGKAFPNGSESAVLKVPDGRVGPAFLMLKNFYVIKRYNNADKYALAVGLLADEIAGYGGLVHDWNRPFVKLTFEEREELQKRLQSYGYYDGKIDGRIGSGSRDAIKAYQARAGLTQDGHPSKEVLTSLRGR*