ggKbase home page

SCN18_30_10_14_R2_B_scaffold_17817_2

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(352..1011)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D062B7 related cluster n=1 Tax=unknown RepID=UPI0003D062B7 similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 219.0
  • Bit_score: 332
  • Evalue 1.80e-88
LuxR family transcriptional regulator {ECO:0000313|EMBL:ESZ47536.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 219.0
  • Bit_score: 332
  • Evalue 2.50e-88
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 219.0
  • Bit_score: 331
  • Evalue 1.50e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
GTGCAATCGGACTACAAATTCGTCATCGCCGACGACCATCCGCTTTTCCGAGGTGCGCTGAAGCAGGCGCTCTCCACGATCGGTAATGATCCGACAATCATCGAGGCCGGCGATTTCGAAAGCGCCAAGACCGCTCTTGTCGATAATGAGGATGTGGATCTCGTCCTGCTCGATCTCTCCATGCCGGGCGCCAGCGGCCTCTCAGCGCTTGTGGCACTTCGTGGGCTGCATTCGGCGGTGCCGGTCATAGTGGTCTCCGCCCATGACAATGTCGTGACCATTCGACGGGCGCTGGAACTCGGCGCTTCCGGCTTCATCTCGAAATCGGCGGGCATGGAGGAGATCCGCGGCGGGATCGAAACAGTGCTCGGCGGCGGCATCGCAACGCCGAAGGATATCGATCTCGGCGTGGAAGCGGATGCCGAGATATCGGACCTGATCGGCCGCATCCAGACCCTGACGCCGCAGCAGACGCGCGTGCTCGGCATGCTGGCGGAAGGGCTTCTGAACAAACAGATTGCCTATGAACTGAGTGTCTCGGAAGCGACCGTCAAGGCGCATGTGTCCGCGATCCTGCAGAAGCTCGGCGTCGACAGCCGAACCCAGGCCGTCATCCTGCTCTCGAAGATCGGCGGTGACCCGTTGCAGACCGCAAGCTGA
PROTEIN sequence
Length: 220
VQSDYKFVIADDHPLFRGALKQALSTIGNDPTIIEAGDFESAKTALVDNEDVDLVLLDLSMPGASGLSALVALRGLHSAVPVIVVSAHDNVVTIRRALELGASGFISKSAGMEEIRGGIETVLGGGIATPKDIDLGVEADAEISDLIGRIQTLTPQQTRVLGMLAEGLLNKQIAYELSVSEATVKAHVSAILQKLGVDSRTQAVILLSKIGGDPLQTAS*